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BaseInfo

ncRNA ID novel_zma_miR6439
Species Zea mays
Class miRNA
Genome position Chr10:46777588-46777636 [-]
Reference genome RefGen_v4
Source SRR2647385
Length 23
Mature sequence(if miRNA) 27 - AUGAAAACCGUCUGUAGAAAUCC - 49
Stem-loop(if miRNA) --AU          UG        
    GAAAACCGUC  UAGAAAUCC
    ||||||||||  ||||||||A
    CUUUUGGCGG  AUCUUUAGU
AAUU          UG        
Stem-loop sequence AUGAAAACCGUCUGUAGAAAUCCAUGAUUUCUAGUGGCGGUUUUCUUAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
HI403059.1
ncRNA:23   CCUAAAGAUGUCUGCCAAAAGUA   1
  ||||||=||||||||||||||*|
targets:77   GGAUUUUUACAGACGGUUUUCUU   99

2.5 Sequence 1184 from Patent EP2074227 NA coding protein psRNATarget
JB163520.1
ncRNA:23   CCUAAAGAUGUCUGCCAAAAGUA   1
  ||||||=||||||||||||||*|
targets:77   GGAUUUUUACAGACGGUUUUCUU   99

2.5 Sequence 1184 from Patent EP2559767 NA coding protein psRNATarget
LQ235189.1
ncRNA:23   CCUAAAGAUGUCUGCCAAAAGUA   1
  ||||||=||||||||||||||*|
targets:77   GGAUUUUUACAGACGGUUUUCUU   99

2.5 Sequence 1184 from Patent EP2985353 NA coding protein psRNATarget