ncRNA ID | novel_zma_miR6434 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr2:12913818-12914023 [-] |
Reference genome | RefGen_v4 |
Source | SRR2647385 |
Length | 21 |
Mature sequence(if miRNA) | 186 - UUGUUCCGGUCUUAGUUAGGU - 206 |
Stem-loop(if miRNA) |
--     CC               G     C  C              A     --    U U   CUA       A    A         CUU  UUCUCUCUC   UUGUU  GGUCUUAGUUAGGUC AAACG GU GUGGUUGACAUAUG ACCCC  ACAU U AGC   UGUAUCU UUUU UCUCUCUUU   GG         A   |||||  ||||||||||||||| ||||| || |||||||||||||| |||||  |||| | |||   ||||||| |||| |||||||||   ||   AACAA  CCAGAGUCAAUCUAG UUUGU CA CACUAACUGUAUAC UGGGG  UGUA A UCG   ACAUAGA AAAA AGAGAGAAA   GG         C AC     AC               G     C  A              C     GU    C C   UAC       G    C         --A  CGUACAUGC |
Stem-loop sequence | UUGUUCCGGUCUUAGUUAGGUCGAAACGCGUCGUGGUUGACAUAUGAACCCCACAUUUUAGCCUAUGUAUCUAUUUUAUCUCUCUUUCUUGGUUCUCUCUCACCGUACAUGCGGAAAAGAGAGACAAAAGAGAUACACAUGCUCACAUGUUGGGGGUCCAUAUGUCAAUCACAACCUGUUUGGAUCUAACUGAGACCCAAACAACA |