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BaseInfo

ncRNA ID novel_zma_miR6432
Species Zea mays
Class miRNA
Genome position Chr2:45611745-45611846 [+]
Reference genome RefGen_v4
Source SRR2647385;SRR2647386;SRR2647388
Length 24
Mature sequence(if miRNA) 79 - AAACUCUAUGGUGUGUAAUUAUGG - 102
Stem-loop(if miRNA) --AUC      A   C         G   GGA            UU      
     AUUACA ACC UAGAGUUUG UGG   UUGUUAGAUUUA  AUGGGCU
     |||||| ||| ||||||||| |||   ||||||||||||  ||||||A
     UAAUGU UGG AUCUCAAAU ACU   AAUAAUUUAAAU  UACCCGG
GGUAU      G   U         G   --A            -U      
Stem-loop sequence AUCAUUACAAACCCUAGAGUUUGGUGGGGAUUGUUAGAUUUAUUAUGGGCUAGGCCCAUUUAAAUUUAAUAAAUCAGUAAACUCUAUGGUGUGUAAUUAUGG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EZ067248.1
ncRNA:24   GGUAUUAAUGUGUGGUAUCUCAAA   1
  |||**|||||||||||||||||||
targets:28   CCACCAUUACACACCAUAGAGUUU   51

0.0 TSA: Zea mays contig02883, mRNA sequence NA coding protein psRNATarget