ncRNA ID | novel_zma_miR6429 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr2:54476909-54477022 [-] |
Reference genome | RefGen_v4 |
Source | SRR2647385 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AGAUCUGUGUUGGGCAAUUCAACC - 24 |
Stem-loop(if miRNA) |
--     ---        UU      UUUUAU   -    -G   GAAC      CACC         UUGAA   CCCAACAC  GGUCUU      UGG CUAA  AGU    CUUUGG    UGUAUAA   |||||   ||||||||  ||||||      ||| ||||  |||    ||||||    ||||||C   AACUU   GGGUUGUG  CUAGAA      ACC GAUU  UCA    GAGAUU    ACAUAUU CC     AAC        -U      ------   U    GA   -AAC      ----       |
Stem-loop sequence | UUGAACCCAACACUUGGUCUUUUUUAUUGGCUAAGAGUGAACCUUUGGCACCUGUAUAACUUAUACAUUAGAGCAAACUAGUUAGUCCAAAGAUCUGUGUUGGGCAAUUCAACC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
EU948808.1 |
|
1.5 | Zea mays clone 385792 mRNA sequence | NA | coding protein | psRNATarget |