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BaseInfo

ncRNA ID novel_zma_miR6428
Species Zea mays
Class miRNA
Genome position Chr2:62774009-62774081 [-]
Reference genome RefGen_v4
Source SRR2647385;SRR2647388;SRR2647389
Length 24
Mature sequence(if miRNA) 50 - GCGGAUCUAAUCCAGAGAGGGAUU - 73
Stem-loop(if miRNA) --GC     U     -A   A           UAUCC
    GGAUC AAUCC  GAG GGGAUUGAGUG     C
    ||||| |||||  ||| |||||||||||     U
    CCUAG UUGGG  UUC CCCUAACUCAC     U
UUCC     U     GG   -           UUUCC
Stem-loop sequence GCGGAUCUAAUCCAGAGAGGGAUUGAGUGUAUCCCUUCCUUUCACUCAAUCCCCUUGGGGGUUUGAUCCCCUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EU945457.1
ncRNA:24   UUAGGGAGAGACCUAAUCUAGGCG   1
  ||||||||*|||||||||||||*|
targets:244   AAUCCCUCCCUGGAUUAGAUCCAC   267

2.5 Zea mays clone 273811 mRNA sequence NA coding protein psRNATarget