ncRNA ID | novel_zma_miR6415 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr2:216439159-216439308 [-] |
Reference genome | RefGen_v4 |
Source | SRR2647385 |
Length | 20 |
Mature sequence(if miRNA) | 1 - ACGGCUGGCUCUAGAAAGUU - 20 |
Stem-loop(if miRNA) |
--       C  -  UC  U           G   CA CUG     CA     --A GA   G              C   CUUUCUA GA CC  CU UAGGAAGUUAG UUU  G   UUGAC  GUCAA   C  AAA CUAACUUCCUACGG C   ||||||| || ||  || ||||||||||| |||  |   |||||  |||||   |  ||| ||||||||||||||   GAAAGAU CU GG  GG AUCCUUCAAUC AAA  C   AACUG  CAGUU   G  UUU GAUUGAAGGAUGUC U UU       -  C  UC  C           G   AG --A     AC     GUC AC   G              C |
Stem-loop sequence | CUUUCUACGACCUCCUUUAGGAAGUUAGGUUUCAGCUGUUGACCAGUCAAACGAAAAGCUAACUUCCUACGGCCUCCUGUAGGAAGUUAGGUUUCAGCUGUUGACCAGUCAAACGAAAAGCUAACUUCCUACGGCUGGCUCUAGAAAGUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_008665803.1 |
|
2.5 | PREDICTED: Zea mays proline-rich protein 36-like (LOC103642550), mRNA | NA | coding protein | psRNATarget |