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BaseInfo

ncRNA ID	novel_zma_miR6413
Species	Zea mays
Class	miRNA
Genome position	Chr9:134891096-134891183 [-]
Reference genome	RefGen_v4
Source	SRR1618883
Length	24
Mature sequence(if miRNA)	1 - AAUACACUCGGCAAAGAAACUCUU - 24
Stem-loop(if miRNA)	--   -C              U  A   G               A   GAG  UCUUUGCCGAGUGU GU UUU UGACACUCGGCAAAG G   |||  |||||||||||||| || ||| |||||||||||||||   CUC  AGAAACGGCUCACA UA AAA ACUGUGAGCCGUUUC C UU   AA              -  A   A               C
Stem-loop sequence	GAGCUCUUUGCCGAGUGUUGUAUUUGUGACACUCGGCAAAGAGCCCUUUGCCGAGUGUCAAAAAAAUACACUCGGCAAAGAAACUCUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_008671736.2	ncRNA:24   UUCUCAAAGAAACGGCUCACAUAA   1   ||||-|||*||||||||||||||| targets:180   AAGA-UUUAUUUGCCGAGUGUAUU   202 Target Full Sequence	1.0	PREDICTED: Zea mays probable serine/threonine-protein kinase PBL28 (LOC103647166), mRNA	NA	coding protein	psRNATarget
HI406685.1	ncRNA:24   UUCUCAAAGAAACGGCUCACAUAA   1   *|*||*||||||||||||||||*| targets:40   UAUAGGUUCUUUGCCGAGUGUAAU   63 Target Full Sequence	2.5	Sequence 4810 from Patent EP2074227	NA	coding protein	psRNATarget
JB167146.1	ncRNA:24   UUCUCAAAGAAACGGCUCACAUAA   1   *|*||*||||||||||||||||*| targets:40   UAUAGGUUCUUUGCCGAGUGUAAU   63 Target Full Sequence	2.5	Sequence 4810 from Patent EP2559767	NA	coding protein	psRNATarget
LQ238815.1	ncRNA:24   UUCUCAAAGAAACGGCUCACAUAA   1   *|*||*||||||||||||||||*| targets:40   UAUAGGUUCUUUGCCGAGUGUAAU   63 Target Full Sequence	2.5	Sequence 4810 from Patent EP2985353	NA	coding protein	psRNATarget
JB167423.1	ncRNA:24   UUCUCAAAGAAACGGCUCACAUAA   1   *|*||*||||||||||||||||*| targets:177   UAUAGGUUCUUUGCCGAGUGUAAU   200 Target Full Sequence	2.5	Sequence 5087 from Patent EP2559767	NA	coding protein	psRNATarget
LQ239092.1	ncRNA:24   UUCUCAAAGAAACGGCUCACAUAA   1   *|*||*||||||||||||||||*| targets:177   UAUAGGUUCUUUGCCGAGUGUAAU   200 Target Full Sequence	2.5	Sequence 5087 from Patent EP2985353	NA	coding protein	psRNATarget
HI406962.1	ncRNA:24   UUCUCAAAGAAACGGCUCACAUAA   1   *|*||*||||||||||||||||*| targets:177   UAUAGGUUCUUUGCCGAGUGUAAU   200 Target Full Sequence	2.5	Sequence 5087 from Patent EP2074227	NA	coding protein	psRNATarget