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BaseInfo

ncRNA ID novel_zma_miR6400
Species Zea mays
Class miRNA
Genome position Chr2:142525840-142525901 [+]
Reference genome RefGen_v4
Source SRR2647385;SRR2647389
Length 21
Mature sequence(if miRNA) 1 - UUGGCUUCUCUGUUUUGGAGA - 21
Stem-loop(if miRNA) --   G   --C            --ACGCA G
  UUG CUU   UCUGUUUUGGAG       G C
  ||| |||   ||||||||||||       |
  AAC GAG   AGGUAAAACCUC       C G
AC   A   UAU            AAACAAA A
Stem-loop sequence UUGGCUUCUCUGUUUUGGAGACGCAGGCGACAAACAAACUCCAAAAUGGAUAUGAGACAACA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_020545537.1
ncRNA:21   AGAGGUUUUGUCUCUUCGGUU   1
  ||||||||*||||||||||||
targets:1782   UCUCCAAAUCAGAGAAGCCAA   1802

1.5 PREDICTED: Zea mays uncharacterized LOC103642960 (LOC103642960), mRNA NA coding protein psRNATarget