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BaseInfo

ncRNA ID novel_zma_miR6395
Species Zea mays
Class miRNA
Genome position Chr1:102399568-102399642 [+]
Reference genome RefGen_v4
Source SRR2647385
Length 24
Mature sequence(if miRNA) 52 - AAUACAGCUUAUUUUCGUCGGCCC - 75
Stem-loop(if miRNA) --              -   ACU              UA
  GCCGACGAAAAUAA UUG   UAUUUUCGUCGGUC  G
  |||||||||||||| |||   ||||||||||||||  C
  CGGCUGCUUUUAUU GAC   AUAAAAGCAGCCAG  U
CC              C   ---              UA
Stem-loop sequence GCCGACGAAAAUAAUUGACUUAUUUUCGUCGGUCUAGCUAUGACCGACGAAAAUACAGCUUAUUUUCGUCGGCCC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT042581.1
ncRNA:24   CCCGGCUGCUUUUAUUCGACAUAA   1
  *||||||||||||||||||*||||
targets:490   AGGCCGACGAAAAUAAGCUAUAUU   513

1.5 Zea mays full-length cDNA clone ZM_BFb0345H15 mRNA, complete cds NA coding protein psRNATarget