Search result

BaseInfo

ncRNA ID novel_zma_miR6389
Species Zea mays
Class miRNA
Genome position Chr1:36053600-36053713 [-]
Reference genome RefGen_v4
Source SRR2647385
Length 24
Mature sequence(if miRNA) 1 - AGAUCUGUGUUGGGCAAUUCAACC - 24
Stem-loop(if miRNA) --     ---        UU       UU        --A    G ACCUUUUGACACCU
  UUGAA   CCCAACAC  GGUCUUU  AUUGGCUA   GUGU A              G
  |||||   ||||||||  |||||||  ||||||||   |||| |              U
  AACUU   GGGUUGUG  CUAGAAA  UGAUUGAU   ACGA G              U
CC     AAC        -U       CC        CAA    - AUCACAUAUUCAAU
Stem-loop sequence UUGAACCCAACACUUGGUCUUUUUAUUGGCUAAGUGUGAACCUUUUGACACCUGUUUAACUUAUACACUAGAGCAAACUAGUUAGUCCAAAGAUCUGUGUUGGGCAAUUCAACC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EU948808.1
ncRNA:24   CCAACUUAACGGGUUGUGUCUAGA   1
  |||||||||||||||||||*||||
targets:147   GGUUGAAUUGCCCAACACAAAUCU   170

1.5 Zea mays clone 385792 mRNA sequence NA coding protein psRNATarget