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BaseInfo

ncRNA ID novel_zma_miR6385
Species Zea mays
Class miRNA
Genome position Chr1:151023306-151023382 [-]
Reference genome RefGen_v4
Source SRR2647385
Length 24
Mature sequence(if miRNA) 1 - AUCCAUCUCUAUACAUGUGUAUUG - 24
Stem-loop(if miRNA) --AUC         U           A       A   
     CACAUGUGU GAGGUGGAUUG GGUGUAA UUAG
     ||||||||| ||||||||||| ||||||| |||U
     GUGUACAUA CUCUACCUAAU CCACAUU AAUU
GUUAU         U           C       G   
Stem-loop sequence AUCCACAUGUGUUGAGGUGGAUUGAGGUGUAAAUUAGUUUAAGUUACACCCUAAUCCAUCUCUAUACAUGUGUAUUG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
LQ235253.1
ncRNA:24   GUUAUGUGUACAUAUCUCUACCUA   1
  *|||*|||||||||*|||||||||
targets:14   GAAUCCACAUGUAUUGAGAUGGAU   37

1.5 Sequence 1248 from Patent EP2985353 NA coding protein psRNATarget
HI403123.1
ncRNA:24   GUUAUGUGUACAUAUCUCUACCUA   1
  *|||*|||||||||*|||||||||
targets:14   GAAUCCACAUGUAUUGAGAUGGAU   37

1.5 Sequence 1248 from Patent EP2074227 NA coding protein psRNATarget
JB163584.1
ncRNA:24   GUUAUGUGUACAUAUCUCUACCUA   1
  *|||*|||||||||*|||||||||
targets:14   GAAUCCACAUGUAUUGAGAUGGAU   37

1.5 Sequence 1248 from Patent EP2559767 NA coding protein psRNATarget