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BaseInfo

ncRNA ID	novel_zma_miR6375
Species	Zea mays
Class	miRNA
Genome position	Chr1:250443146-250443197 [-]
Reference genome	RefGen_v4
Source	SRR2647385
Length	23
Mature sequence(if miRNA)	1 - UUAGAUUCCGUAUUUAGUAAUUU - 23
Stem-loop(if miRNA)	--                A     AC   AUUGCUAAAUACGGAA CUAAA  U   |||||||||||||||| |||||   UAAUGAUUUAUGCCUU GAUUU  C UU                A     AU
Stem-loop sequence	AUUGCUAAAUACGGAAACUAAAACUCUAUUUAGAUUCCGUAUUUAGUAAUUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
JB167596.1	ncRNA:23   UUUAAUGAUUUAUGCCUUAGAUU   1   ||||||||||||||||||*|||| targets:13   AAAUUACUAAAUACGGAAACUAA   35 Target Full Sequence	1.5	Sequence 5260 from Patent EP2559767	NA	coding protein	psRNATarget
HI407135.1	ncRNA:23   UUUAAUGAUUUAUGCCUUAGAUU   1   ||||||||||||||||||*|||| targets:13   AAAUUACUAAAUACGGAAACUAA   35 Target Full Sequence	1.5	Sequence 5260 from Patent EP2074227	NA	coding protein	psRNATarget
LQ239265.1	ncRNA:23   UUUAAUGAUUUAUGCCUUAGAUU   1   ||||||||||||||||||*|||| targets:13   AAAUUACUAAAUACGGAAACUAA   35 Target Full Sequence	1.5	Sequence 5260 from Patent EP2985353	NA	coding protein	psRNATarget
XM_020546127.1	ncRNA:23   UUUAAUGAUUUAUGCCUUAGAUU   1   |||||=||||||||||||*|||| targets:1451   AAAUUGCUAAAUACGGAAACUAA   1473 Target Full Sequence	2.5	PREDICTED: Zea mays myb-related protein 330 (LOC103642827), mRNA	NA	coding protein	psRNATarget
HI406932.1	ncRNA:23   UUUAAUGAUUUAUGCCUUAGAUU   1   |||||=||||||||||||*|||| targets:39   AAAUUGCUAAAUACGGAAACUAA   61 Target Full Sequence	2.5	Sequence 5057 from Patent EP2074227	NA	coding protein	psRNATarget
JB167393.1	ncRNA:23   UUUAAUGAUUUAUGCCUUAGAUU   1   |||||=||||||||||||*|||| targets:39   AAAUUGCUAAAUACGGAAACUAA   61 Target Full Sequence	2.5	Sequence 5057 from Patent EP2559767	NA	coding protein	psRNATarget
LQ239062.1	ncRNA:23   UUUAAUGAUUUAUGCCUUAGAUU   1   |||||=||||||||||||*|||| targets:39   AAAUUGCUAAAUACGGAAACUAA   61 Target Full Sequence	2.5	Sequence 5057 from Patent EP2985353	NA	coding protein	psRNATarget
NM_001112512.2	ncRNA:23   UUUAAUGAUUUAUGCCUUAGAUU   1   |||*|=||||||||||||*|||| targets:1602   AAAAUGCUAAAUACGGAAACUAA   1624 Target Full Sequence	2.5	Zea mays Aldose reductase (pco147797a), mRNA	NA	coding protein	psRNATarget
XM_008657966.2	ncRNA:23   UUUAAUGAUUUAUGCCUUAGAUU   1   |||*|=||||||||||||*|||| targets:28   AAAAUGCUAAAUACGGAAACUAA   50 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC103635535 (LOC103635535), transcript variant X1, mRNA	NA	coding protein	psRNATarget