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BaseInfo

ncRNA ID novel_zma_miR6369
Species Zea mays
Class miRNA
Genome position Chr8:4743965-4744041 [+]
Reference genome RefGen_v4
Source SRR1583941;SRR1583942
Length 24
Mature sequence(if miRNA) 1 - GACGUCUUGGCUUUUCUAGAUACA - 24
Stem-loop(if miRNA) --        G C              AGCU    UUA
  GACGUCUU G UUUUCUAGAUACAU    UUUA   U
  |||||||| | ||||||||||||||    ||||   U
  CUGUAGAA C AAAAGAUCUAUGUG    AGAU   U
UU        G A              AUAC    CUA
Stem-loop sequence GACGUCUUGGCUUUUCUAGAUACAUAGCUUUUAUUAUUUAUCUAGACAUAGUGUAUCUAGAAAAACGAAGAUGUCUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT042146.2
ncRNA:24   ACAUAGAUCUUUUCGGUUCUGCAG   1
  ||||||||||||||||||*|||||
targets:243   UGUAUCUAGAAAAGCCAAAACGUC   266

1.5 Zea mays full-length cDNA clone ZM_BFb0146F01 mRNA, complete cds NA coding protein psRNATarget