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BaseInfo

ncRNA ID novel_zma_miR6365
Species Zea mays
Class miRNA
Genome position Chr9:91927437-91927486 [+]
Reference genome RefGen_v4
Source SRR2647385;SRR2647390
Length 24
Mature sequence(if miRNA) 27 - GCCGACCGCUAGUGAAAAUCGAUU - 50
Stem-loop(if miRNA) --                   UUAU
  UCGAUUUUCACUGGCGGUU    U
  |||||||||||||||||||
  AGCUAAAAGUGAUCGCCAG    A
UU                   CCGC
Stem-loop sequence UCGAUUUUCACUGGCGGUUUUAUUACGCCGACCGCUAGUGAAAAUCGAUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EU960305.1
ncRNA:24   UUAGCUAAAAGUGAUCGCCAGCCG   1
  ||||||||||||||||||||||*|
targets:677   AAUCGAUUUUCACUAGCGGUCGAC   700

1.5 Zea mays clone 223391 hypothetical protein mRNA, complete cds NA coding protein psRNATarget
EU960305.1
ncRNA:24   UUAGCUAAAAGUGAUCGCCAGCCG   1
  ||||*|||||||||=|||||||||
targets:633   AAUCAAUUUUCACUGGCGGUCGGC   656

1.5 Zea mays clone 223391 hypothetical protein mRNA, complete cds NA coding protein psRNATarget
NM_001150001.1
ncRNA:24   UUAGCUAAAAGUGAUCGCCAGCCG   1
  ||||||||||||||||||||||*|
targets:677   AAUCGAUUUUCACUAGCGGUCGAC   700

1.5 Zea mays uncharacterized LOC100276144 (LOC100276144), mRNA NA coding protein psRNATarget
NM_001150001.1
ncRNA:24   UUAGCUAAAAGUGAUCGCCAGCCG   1
  ||||*|||||||||=|||||||||
targets:633   AAUCAAUUUUCACUGGCGGUCGGC   656

1.5 Zea mays uncharacterized LOC100276144 (LOC100276144), mRNA NA coding protein psRNATarget