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BaseInfo

ncRNA ID	osa-miRf10232-npr
Species	Oryza sativa
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	23
Mature sequence(if miRNA)	NA - GAGAAACCAUCUUUGGUCGGUCG - NA
Stem-loop(if miRNA)	A  CG C        G              CACC     -  GC   A GGA UU  G CGACCGAC AAAGAUGGUUUCUC    AGUGA CG  UAC C ||| ||  | |||||||| ||||||||||||||    ||||| ||  ||| CCU AA  C GCUGGCUG UUUCUACCAAAGAG    UCACU GC  AUG C    A  AU U        G              AUCA     U  --   U
Stem-loop sequence	GGAAUUCGGCCGACCGACGAAAGAUGGUUUCUCCACCAGUGACGGCUACACCUGUACGUUCACUACUAGAGAAACCAUCUUUGGUCGGUCGUCUAAAAUCC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK289098.1	ncRNA:23   GCUGGCUGGUUUCUACCAAAGAG   1   ||||||||||||||||||||||| targets:368   CGACCGACCAAAGAUGGUUUCUC   390 Target Full Sequence	0.0	Oryza sativa Japonica Group cDNA, clone: J090096E23, full insert sequence	NA	coding protein	psRNATarget
AK288598.1	ncRNA:23   GCUGGCUGGUUUCUACCAAAGAG   1   ||||||||*|||||||||||||| targets:1150   CGACCGACGAAAGAUGGUUUCUC   1172 Target Full Sequence	1.0	Oryza sativa Japonica Group cDNA, clone: J090051P05, full insert sequence	NA	coding protein	psRNATarget
AK288734.1	ncRNA:23   GCUGGCUGGUUUCUACCAAAGAG   1   ||||||||*|||||||||||||| targets:139   CGACCGACGAAAGAUGGUUUCUC   161 Target Full Sequence	1.0	Oryza sativa Japonica Group cDNA, clone: J090063I24, full insert sequence	NA	coding protein	psRNATarget
AK288863.1	ncRNA:23   GCUGGCUGGUUUCUACCAAAGAG   1   |||||||=||||*|||||||||| targets:1712   CGACCGAUCAAAAAUGGUUUCUC   1734 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090077I20, full insert sequence	NA	coding protein	psRNATarget
AK287459.1	ncRNA:23   GCUGGCUGGUUUCUACCAAAGAG   1   =||||||*=|||||||||||||| targets:3486   UGACCGAGUAAAGAUGGUUUCUC   3508 Target Full Sequence	2.0	Oryza sativa Japonica Group cDNA, clone: J043019O07, full insert sequence	NA	coding protein	psRNATarget
XM_015779327.1	ncRNA:23   GCUGGCUGGUUUCUACCAAAGAG   1   |||||||*||||||||*|||||| targets:5   CGACCGAGCAAAGAUGAUUUCUC   27 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group wall-associated receptor kinase 2-like (LOC107278547), mRNA	wall-associated receptor kinase 2-like(LOC107278547)	coding protein	psRNATarget
AK288424.1	ncRNA:23   GCUGGCUGGUUUCUACCAAAGAG   1   |||||*|||||||||*||||||| targets:2512   CGACCAACCAAAGAUAGUUUCUC   2534 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090032J12, full insert sequence	NA	coding protein	psRNATarget
XM_015755979.1	ncRNA:23   GCUGGCUGGUUUCUACCAAAGAG   1   |*|||*|*||||||||||||||| targets:1438   CAACCAAGCAAAGAUGGUUUCUC   1460 Target Full Sequence	2.0	PREDICTED: Oryza sativa Japonica Group PTI1-like tyrosine-protein kinase At3g15890 (LOC107276656), mRNA	PTI1-like tyrosine-protein kinase At3g15890(LOC107276656)	coding protein	psRNATarget