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BaseInfo

ncRNA ID novel_zma_miR6345
Species Zea mays
Class miRNA
Genome position Chr1:252677131-252677315 [+]
Reference genome RefGen_v4
Source SRR2647385;SRR2647391
Length 24
Mature sequence(if miRNA) 1 - GACUCCUAGUGCACUCGGCAAAGG - 24
Stem-loop(if miRNA) ---GA U  U    -              A  GAUAAAG     -----  UG  GAUCCA     C     C  GCAC  UG       A      AU
     C CC AGUG CACUCGGCAAAGGA CU       GGGCC     AC  GU      UUUGU GAGUG UA    AG  GGCACUC GCAAAG  A
     | || |||| |||||||||||||| ||       |||||     ||  ||      ||||| ||||| ||    ||  ||||||| ||||||  G
     G GG UCAC GUGAGCUGUUUCUU GA       CCCGG     UG  CA      AAACG CUCGC AU    UC  CCGUGAG UGUUUC  A
CACGG U  C    U              C  -GGAACA     GGAAA  GU  ---AAG     A     -  --AA  CA       C      CG
Stem-loop sequence GACUCCUAGUGCACUCGGCAAAGGAACUGAUAAAGGGGCCACUGGUGAUCCAUUUGUCGAGUGCUAGCACAGUGGGCACUCAGCAAAGAUAGAGCCUUUGUCGAGUGCCACCUAAUACGCUCAGCAAAGAAACUGGUAAAGGGGCCCACAAGGAGCUUCUUUGUCGAGUGUCACUCGGUGGGCAC