ncRNA ID | novel_zma_miR6345 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr1:252677131-252677315 [+] |
Reference genome | RefGen_v4 |
Source | SRR2647385;SRR2647391 |
Length | 24 |
Mature sequence(if miRNA) | 1 - GACUCCUAGUGCACUCGGCAAAGG - 24 |
Stem-loop(if miRNA) |
---GA U  U    -              A  GAUAAAG     -----  UG  GAUCCA     C     C  GCAC  UG       A      AU      C CC AGUG CACUCGGCAAAGGA CU       GGGCC     AC  GU      UUUGU GAGUG UA    AG  GGCACUC GCAAAG  A      | || |||| |||||||||||||| ||       |||||     ||  ||      ||||| ||||| ||    ||  ||||||| ||||||  G      G GG UCAC GUGAGCUGUUUCUU GA       CCCGG     UG  CA      AAACG CUCGC AU    UC  CCGUGAG UGUUUC  A CACGG U  C    U              C  -GGAACA     GGAAA  GU  ---AAG     A     -  --AA  CA       C      CG |
Stem-loop sequence | GACUCCUAGUGCACUCGGCAAAGGAACUGAUAAAGGGGCCACUGGUGAUCCAUUUGUCGAGUGCUAGCACAGUGGGCACUCAGCAAAGAUAGAGCCUUUGUCGAGUGCCACCUAAUACGCUCAGCAAAGAAACUGGUAAAGGGGCCCACAAGGAGCUUCUUUGUCGAGUGUCACUCGGUGGGCAC |