Search result

BaseInfo

ncRNA ID	novel_zma_miR6339
Species	Zea mays
Class	miRNA
Genome position	Chr9:130822871-130822968 [+]
Reference genome	RefGen_v4
Source	SRR2647385
Length	24
Mature sequence(if miRNA)	75 - GUCUUUGCCGAGUGUCACUCGGUA - 98
Stem-loop(if miRNA)	--GA U             A    A U       C     A       C A     G GUGACACUCGGCA GAGA C CGGUGAA AGUAC UCGGCAA G C     | ||||||||||||| |||| | ||||||| ||||| ||||||| |     C CACUGUGAGCCGU UUCU G GUUAUUU UCAUG AGCCGUU C U AUGG U             -    - -       U     -       U U
Stem-loop sequence	GAGUGUGACACUCGGCAAGAGAACUCGGUGAACAGUACAUCGGCAACGACUUCUUUGCCGAGUACUUUUUAUUGGUCUUUGCCGAGUGUCACUCGGUA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_020543430.1	ncRNA:24   AUGGCUCACUGUGAGCCGUUUCUG   1   *|*****||||||||||||||||* targets:1212   AAGAAUAUGACACUCGGCAAAGAG   1235 Target Full Sequence	3.0	PREDICTED: Zea mays protein enabled homolog (LOC103636633), mRNA	NA	coding protein	psRNATarget
JB166502.1	ncRNA:19   UCACUGUGAGCCGUUUCUG   1   =|*|||||||||||||||* targets:1   GGAGACACUCGGCAAAGAA   19 Target Full Sequence	3.0	Sequence 4166 from Patent EP2559767	NA	coding protein	psRNATarget
LQ238171.1	ncRNA:19   UCACUGUGAGCCGUUUCUG   1   =|*|||||||||||||||* targets:1   GGAGACACUCGGCAAAGAA   19 Target Full Sequence	3.0	Sequence 4166 from Patent EP2985353	NA	coding protein	psRNATarget
HI406041.1	ncRNA:19   UCACUGUGAGCCGUUUCUG   1   =|*|||||||||||||||* targets:1   GGAGACACUCGGCAAAGAA   19 Target Full Sequence	3.0	Sequence 4166 from Patent EP2074227	NA	coding protein	psRNATarget