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BaseInfo

ncRNA ID	novel_zma_miR6338
Species	Zea mays
Class	miRNA
Genome position	Chr8:3138548-3138620 [-]
Reference genome	RefGen_v4
Source	SRR1618883;SRR4237221;SRR4237226;SRR5100248
Length	24
Mature sequence(if miRNA)	1 - AGCCGUCGGACAUAAGAUUAUGUC - 24
Stem-loop(if miRNA)	--                    ACAAGCC   A    U   CGUAAUCUUAUGUCCGACGG       GUC GACA C   ||||||||||||||||||||       ||| |||| G   GUAUUAGAAUACAGGCUGCC       CAG CUGU G CU                    ----GAA   A    U
Stem-loop sequence	CGUAAUCUUAUGUCCGACGGACAAGCCGUCAGACAUCGGUUGUCAGACAAGCCGUCGGACAUAAGAUUAUGUC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
HI406959.1	ncRNA:24   CUGUAUUAGAAUACAGGCUGCCGA   1   |||||||*|||||||||*|||||| targets:9   GACAUAAGCUUAUGUCCAACGGCU   32 Target Full Sequence	2.5	Sequence 5084 from Patent EP2074227	NA	coding protein	psRNATarget
JB167420.1	ncRNA:24   CUGUAUUAGAAUACAGGCUGCCGA   1   |||||||*|||||||||*|||||| targets:9   GACAUAAGCUUAUGUCCAACGGCU   32 Target Full Sequence	2.5	Sequence 5084 from Patent EP2559767	NA	coding protein	psRNATarget
LQ239089.1	ncRNA:24   CUGUAUUAGAAUACAGGCUGCCGA   1   |||||||*|||||||||*|||||| targets:9   GACAUAAGCUUAUGUCCAACGGCU   32 Target Full Sequence	2.5	Sequence 5084 from Patent EP2985353	NA	coding protein	psRNATarget
JB167399.1	ncRNA:24   CUGUAUUAGAAUACAGGCUGCCGA   1   *||||||*|||||||||*|||||| targets:59   AACAUAAGCUUAUGUCCAACGGCU   82 Target Full Sequence	2.5	Sequence 5063 from Patent EP2559767	NA	coding protein	psRNATarget
HI406938.1	ncRNA:24   CUGUAUUAGAAUACAGGCUGCCGA   1   *||||||*|||||||||*|||||| targets:59   AACAUAAGCUUAUGUCCAACGGCU   82 Target Full Sequence	2.5	Sequence 5063 from Patent EP2074227	NA	coding protein	psRNATarget
LQ239068.1	ncRNA:24   CUGUAUUAGAAUACAGGCUGCCGA   1   *||||||*|||||||||*|||||| targets:59   AACAUAAGCUUAUGUCCAACGGCU   82 Target Full Sequence	2.5	Sequence 5063 from Patent EP2985353	NA	coding protein	psRNATarget
EU944465.1	ncRNA:24   CUGUAUUAGAAUACAGGCUGCCGA   1   *||||||*|||||||||*|||||| targets:187   AACAUAAGCUUAUGUCCAACGGCU   210 Target Full Sequence	2.5	Zea mays clone 219525 mRNA sequence	NA	coding protein	psRNATarget
JB166317.1	ncRNA:24   CUGUAUUAGAAUACAGGCUGCCGA   1   ||*||||**||||||||||||||* targets:10   GAGAUAAGGUUAUGUCCGACGGCC   33 Target Full Sequence	3.0	Sequence 3981 from Patent EP2559767	NA	coding protein	psRNATarget
LQ237986.1	ncRNA:24   CUGUAUUAGAAUACAGGCUGCCGA   1   ||*||||**||||||||||||||* targets:10   GAGAUAAGGUUAUGUCCGACGGCC   33 Target Full Sequence	3.0	Sequence 3981 from Patent EP2985353	NA	coding protein	psRNATarget
HI405856.1	ncRNA:24   CUGUAUUAGAAUACAGGCUGCCGA   1   ||*||||**||||||||||||||* targets:10   GAGAUAAGGUUAUGUCCGACGGCC   33 Target Full Sequence	3.0	Sequence 3981 from Patent EP2074227	NA	coding protein	psRNATarget