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BaseInfo

ncRNA ID ath-miRf10071-npr
Species Arabidopsis thaliana
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 24
Mature sequence(if miRNA) NA - UACUCGACCAAAGGGUCGAGUGGU - NA
Stem-loop(if miRNA)    -UU          AGGG          -   A  GAG
GUC   CUACUCGACC    GGUCGAGUGG UCU UU   G
|||   ||||||||||    |||||||||| ||| ||
UAG   GGUGAGCUGG    CCAGCUCAUC AGG AG   U
   UUU          GAAA          U   A  UGU
Stem-loop sequence GUCUUCUACUCGACCAGGGGGUCGAGUGGUCUAUUGAGGUUGUGAAGGAUCUACUCGACCAAAGGGUCGAGUGGUUUGAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
NM_001126013.2
ncRNA:24   UGGUGAGCUGGGAAACCAGCUCAU   1
  *====||||*|||||||||||*||
targets:3083   UUUGUUCGAACCUUUGGUCGAUUA   3106

2.5 Arabidopsis thaliana Protein kinase superfamily protein mRNA Protein kinase superfamily protein(AT5G63370) coding protein psRNATarget
NM_001345588.1
ncRNA:24   UGGUGAGCUGGGAAACCAGCUCAU   1
  *====||||*|||||||||||*||
targets:3168   UUUGUUCGAACCUUUGGUCGAUUA   3191

2.5 Arabidopsis thaliana Protein kinase superfamily protein mRNA Protein kinase superfamily protein(AT5G63370) coding protein psRNATarget
NM_001345589.1
ncRNA:24   UGGUGAGCUGGGAAACCAGCUCAU   1
  *====||||*|||||||||||*||
targets:3235   UUUGUUCGAACCUUUGGUCGAUUA   3258

2.5 Arabidopsis thaliana Protein kinase superfamily protein mRNA Protein kinase superfamily protein(AT5G63370) coding protein psRNATarget
NM_001203676.2
ncRNA:24   UGGUGAGCUGGGAAACCAGCUCAU   1
  *====||||*|||||||||||*||
targets:3272   UUUGUUCGAACCUUUGGUCGAUUA   3295

2.5 Arabidopsis thaliana Protein kinase superfamily protein mRNA Protein kinase superfamily protein(AT5G63370) coding protein psRNATarget
NM_001345587.1
ncRNA:24   UGGUGAGCUGGGAAACCAGCUCAU   1
  *====||||*|||||||||||*||
targets:3306   UUUGUUCGAACCUUUGGUCGAUUA   3329

2.5 Arabidopsis thaliana Protein kinase superfamily protein mRNA Protein kinase superfamily protein(AT5G63370) coding protein psRNATarget
NM_001345586.1
ncRNA:24   UGGUGAGCUGGGAAACCAGCUCAU   1
  *====||||*|||||||||||*||
targets:3337   UUUGUUCGAACCUUUGGUCGAUUA   3360

2.5 Arabidopsis thaliana Protein kinase superfamily protein mRNA Protein kinase superfamily protein(AT5G63370) coding protein psRNATarget
NM_125732.3
ncRNA:24   UGGUGAGCUGGGAAACCAGCUCAU   1
  *====||||*|||||||||||*||
targets:3410   UUUGUUCGAACCUUUGGUCGAUUA   3433

2.5 Arabidopsis thaliana Protein kinase superfamily protein mRNA Protein kinase superfamily protein(AT5G63370) coding protein psRNATarget