Search result

BaseInfo

ncRNA ID novel_zma_miR6324
Species Zea mays
Class miRNA
Genome position Chr8:18320060-18320111 [-]
Reference genome RefGen_v4
Source SRR2647385
Length 25
Mature sequence(if miRNA) 1 - CCGGUGUGCUAGCGGAGCAAUGGCU - 25
Stem-loop(if miRNA) --   ---        -  AUU      A
  CCA   CUCCGCUA CA   CACCGG C
  |||   |||||||| ||   |||||| U
  GGU   GAGGCGAU GU   GUGGCC G
UC   AAC        C  ---      U
Stem-loop sequence CCACUCCGCUACAAUUCACCGGACUGUCCGGUGUGCUAGCGGAGCAAUGGCU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT083610.2
ncRNA:25   UCGGUAACGAGGCGAUCGUGUGGCC   1
  ||||=||||||||||=|||||||||
targets:684   AGCCGUUGCUCCGCUGGCACACCGG   708

1.5 Zea mays full-length cDNA clone ZM_BFb0019A02 mRNA, complete cds NA coding protein psRNATarget
BT069074.2
ncRNA:25   UCGGUAACGAGGCGAUCGUGUGGCC   1
  ||===||||||||||=|||||||||
targets:647   AGUUGUUGCUCCGCUGGCACACCGG   671

1.5 Zea mays full-length cDNA clone ZM_BFb0158J22 mRNA, complete cds NA coding protein psRNATarget