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BaseInfo

ncRNA ID	novel_zma_miR6318
Species	Zea mays
Class	miRNA
Genome position	Chr8:93474859-93474937 [-]
Reference genome	RefGen_v4
Source	SRR2647385;SRR2647386;SRR2647389
Length	24
Mature sequence(if miRNA)	1 - AAGAUCUACGGCGCCGAGGUACGC - 24
Stem-loop(if miRNA)	--    G                  C A       AUGC   GUAC UCGGCGCCGUAGAUCUUG C CCGAGGU    G   |||| |||||||||||||||||| | |||||||    C   CAUG AGCCGCGGCAUCUAGAAC G GGCUCUA    C CG    G                  C C       GGUA
Stem-loop sequence	GUACGUCGGCGCCGUAGAUCUUGCCACCGAGGUAUGCGCCAUGGAUCUCGGCGCCAAGAUCUACGGCGCCGAGGUACGC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_020544295.1	ncRNA:24   CGCAUGGAGCCGCGGCAUCUAGAA   1   *||||||||||||||*|||||||| targets:2   ACGUACCUCGGCGCCAUAGAUCUU   25 Target Full Sequence	1.5	PREDICTED: Zea mays uncharacterized LOC103644543 (LOC103644543), mRNA	NA	coding protein	psRNATarget
XM_020545942.1	ncRNA:24   CGCAUGGAGCCGCGGCAUCUAGAA   1   *||||||||||||||*|||||||| targets:159   ACGUACCUCGGCGCCAUAGAUCUU   182 Target Full Sequence	1.5	PREDICTED: Zea mays uncharacterized LOC109943114 (LOC109943114), mRNA	NA	coding protein	psRNATarget
XM_020545943.1	ncRNA:24   CGCAUGGAGCCGCGGCAUCUAGAA   1   *||||||||||||||*|||||||| targets:159   ACGUACCUCGGCGCCAUAGAUCUU   182 Target Full Sequence	1.5	PREDICTED: Zea mays uncharacterized LOC109943115 (LOC109943115), mRNA	NA	coding protein	psRNATarget
XM_008666282.2	ncRNA:24   CGCAUGGAGCCGCGGCAUCUAGAA   1   *||||||||||||||*|||||||| targets:159   ACGUACCUCGGCGCCAUAGAUCUU   182 Target Full Sequence	1.5	PREDICTED: Zea mays uncharacterized LOC103643129 (LOC103643129), mRNA	NA	coding protein	psRNATarget
XM_008652363.2	ncRNA:24   CGCAUGGAGCCGCGGCAUCUAGAA   1   *||||||||||||||*|||||||| targets:163   ACGUACCUCGGCGCCAUAGAUCUU   186 Target Full Sequence	1.5	PREDICTED: Zea mays uncharacterized LOC103631452 (LOC103631452), mRNA	NA	coding protein	psRNATarget
XM_020541347.1	ncRNA:24   CGCAUGGAGCCGCGGCAUCUAGAA   1   *||||||||||||||*|||||||| targets:163   ACGUACCUCGGCGCCAUAGAUCUU   186 Target Full Sequence	1.5	PREDICTED: Zea mays uncharacterized LOC109940949 (LOC109940949), mRNA	NA	coding protein	psRNATarget
XM_020537732.1	ncRNA:24   CGCAUGGAGCCGCGGCAUCUAGAA   1   *||||||||||||||*|||||||| targets:228   ACGUACCUCGGCGCCAUAGAUCUU   251 Target Full Sequence	1.5	PREDICTED: Zea mays uncharacterized LOC109939552 (LOC109939552), mRNA	NA	coding protein	psRNATarget
XM_008654703.2	ncRNA:24   CGCAUGGAGCCGCGGCAUCUAGAA   1   *||||||||||||||*|||||||| targets:935   ACGUACCUCGGCGCCAUAGAUCUU   958 Target Full Sequence	1.5	PREDICTED: Zea mays uncharacterized LOC103633011 (LOC103633011), mRNA	NA	coding protein	psRNATarget
XM_008678030.1	ncRNA:24   CGCAUGGAGCCGCGGCAUCUAGAA   1   *=|||||||||||||*|||||||| targets:1   AUGUACCUCGGCGCCAUAGAUCUU   24 Target Full Sequence	1.5	PREDICTED: Zea mays uncharacterized LOC103652452 (LOC103652452), mRNA	NA	coding protein	psRNATarget
XM_008666663.2	ncRNA:24   CGCAUGGAGCCGCGGCAUCUAGAA   1   *||-|*|||||||||*|||||||| targets:781   CCG-AGCUCGGCGCCAUAGAUCUU   803 Target Full Sequence	2.5	PREDICTED: Zea mays hypothetical protein (LOC103643463), mRNA	NA	coding protein	psRNATarget
XM_020541199.1	ncRNA:24   CGCAUGGAGCCGCGGCAUCUAGAA   1   *||-|*|||||||||*|||||||| targets:129   CCG-AGCUCGGCGCCAUAGAUCUU   151 Target Full Sequence	2.5	PREDICTED: Zea mays protein trichome birefringence-like 10 (LOC109940862), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_020541199.1	ncRNA:24   CGCAUGGAGCCGCGGCAUCUAGAA   1   *||-|*|||||||||*|||||||| targets:1221   CCG-AGCUCGGCGCCAUAGAUCUU   1243 Target Full Sequence	2.5	PREDICTED: Zea mays protein trichome birefringence-like 10 (LOC109940862), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_020541198.1	ncRNA:24   CGCAUGGAGCCGCGGCAUCUAGAA   1   *||-|*|||||||||*|||||||| targets:127   CCG-AGCUCGGCGCCAUAGAUCUU   149 Target Full Sequence	2.5	PREDICTED: Zea mays protein trichome birefringence-like 10 (LOC109940862), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_020541198.1	ncRNA:24   CGCAUGGAGCCGCGGCAUCUAGAA   1   *||-|*|||||||||*|||||||| targets:1219   CCG-AGCUCGGCGCCAUAGAUCUU   1241 Target Full Sequence	2.5	PREDICTED: Zea mays protein trichome birefringence-like 10 (LOC109940862), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_008655193.2	ncRNA:24   CGCAUGGAGCCGCGGCAUCUAGAA   1   *||-|*|||||||||*|||||||| targets:187   CCG-AGCUCGGCGCCAUAGAUCUU   209 Target Full Sequence	2.5	PREDICTED: Zea mays protein trichome birefringence-like 10 (LOC103633510), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_008655193.2	ncRNA:24   CGCAUGGAGCCGCGGCAUCUAGAA   1   *||-|*|||||||||*|||||||| targets:1278   CCG-AGCUCGGCGCCAUAGAUCUU   1300 Target Full Sequence	2.5	PREDICTED: Zea mays protein trichome birefringence-like 10 (LOC103633510), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_008655192.2	ncRNA:24   CGCAUGGAGCCGCGGCAUCUAGAA   1   *||-|*|||||||||*|||||||| targets:187   CCG-AGCUCGGCGCCAUAGAUCUU   209 Target Full Sequence	2.5	PREDICTED: Zea mays protein trichome birefringence-like 10 (LOC103633510), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_008655192.2	ncRNA:24   CGCAUGGAGCCGCGGCAUCUAGAA   1   *||-|*|||||||||*|||||||| targets:1278   CCG-AGCUCGGCGCCAUAGAUCUU   1300 Target Full Sequence	2.5	PREDICTED: Zea mays protein trichome birefringence-like 10 (LOC103633510), transcript variant X1, mRNA	NA	coding protein	psRNATarget