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BaseInfo

ncRNA ID novel_zma_miR6316
Species Zea mays
Class miRNA
Genome position Chr8:107623324-107623413 [-]
Reference genome RefGen_v4
Source SRR2647385
Length 24
Mature sequence(if miRNA) 1 - UUCGAUCCUCCCGGGAUCCCGGGU - 24
Stem-loop(if miRNA) --AG         A          --                  AA
    GGGAUCCCG GAGGAUUGGA  GGGGAUUGAGGGGGAAAU  A
    ||||||||| ||||||||||  ||||||||||||||||||
    CCCUAGGGC CUCCUAGCUU  CCCCUAACUCCCCCUUUA  C
UGGG         C          CC                  AU
Stem-loop sequence AGGGGAUCCCGAGAGGAUUGGAGGGGAUUGAGGGGGAAAUAAACUAAUUUCCCCCUCAAUCCCCCCUUCGAUCCUCCCGGGAUCCCGGGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
JB163479.1
ncRNA:24   UGGGCCCUAGGGCCCUCCUAGCUU   1
  ****||||||||||||||||=|||
targets:3   CAAGGGGAUCCCGGGAGGAUUGAA   26

1.5 Sequence 1143 from Patent EP2559767 NA coding protein psRNATarget
HI403018.1
ncRNA:24   UGGGCCCUAGGGCCCUCCUAGCUU   1
  ****||||||||||||||||=|||
targets:3   CAAGGGGAUCCCGGGAGGAUUGAA   26

1.5 Sequence 1143 from Patent EP2074227 NA coding protein psRNATarget
LQ235148.1
ncRNA:24   UGGGCCCUAGGGCCCUCCUAGCUU   1
  ****||||||||||||||||=|||
targets:3   CAAGGGGAUCCCGGGAGGAUUGAA   26

1.5 Sequence 1143 from Patent EP2985353 NA coding protein psRNATarget