ncRNA ID | novel_zma_miR6306 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr8:170274425-170274496 [-] |
Reference genome | RefGen_v4 |
Source | SRR2647385 |
Length | 24 |
Mature sequence(if miRNA) | 49 - GGAUUUAGAGUGGUUCAGGCCGCU - 72 |
Stem-loop(if miRNA) |
--GGA       UG  U        --     CGUAA      UUUAGAG  GU CAGGCCGC  UGGAG     U      |||||||  || ||||||||  |||||      GAGUUUC  UA GUUUGGUG  ACCUC     A UUCGA       GU  U        UC     UUCCC |
Stem-loop sequence | GGAUUUAGAGUGGUUCAGGCCGCUGGAGCGUAAUACCCUUCUCCACUGUGGUUUGUAUUGCUUUGAGAGCUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
EU951262.1 |
|
2.5 | Zea mays clone 689732 mRNA sequence | NA | coding protein | psRNATarget | |||||||||
EZ063125.1 |
|
2.0 | TSA: Zea mays contig64247, mRNA sequence | NA | coding protein | psRNATarget | |||||||||
XM_020545234.1 |
|
2.0 | PREDICTED: Zea mays ABC transporter I family member 1-like (LOC103642079), transcript variant X2, mRNA | NA | coding protein | psRNATarget |