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BaseInfo

ncRNA ID novel_zma_miR6298
Species Zea mays
Class miRNA
Genome position Chr7:116959415-116959514 [+]
Reference genome RefGen_v4
Source SRR2647385
Length 24
Mature sequence(if miRNA) 77 - AGUGUCUGUGAUGUUAUAUAUCAC - 100
Stem-loop(if miRNA) --                                           CU  A
  GAUAUAUAACAUCACAGGCGCUUUUUUAUUCCGACCGCCUGUG  AG U
  |||||||||||||||||||||||||||||||||||||||||||  || U
  CUAUAUAUUGUAGUGUCUGUGAAAAAAUAAGGCUGGCGGACAC  UC A
CA                                           -U  A
Stem-loop sequence GAUAUAUAACAUCACAGGCGCUUUUUUAUUCCGACCGCCUGUGCUAGAUUAACUUCACAGGCGGUCGGAAUAAAAAAGUGUCUGUGAUGUUAUAUAUCAC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_008671615.2
ncRNA:24   CACUAUAUAUUGUAGUGUCUGUGA   1
  *||*||*||||||||*||||||||
targets:1392   UUGCUAAAUAACAUCUCAGACACU   1415

2.5 PREDICTED: Zea mays uncharacterized LOC100275682 (LOC100275682), transcript variant X1, mRNA NA coding protein psRNATarget