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BaseInfo

ncRNA ID novel_zma_miR6297
Species Zea mays
Class miRNA
Genome position Chr7:104270928-104270986 [+]
Reference genome RefGen_v4
Source SRR2647385
Length 24
Mature sequence(if miRNA) 1 - ACUCUGGCCGCCGAAAAUAUAGCC - 24
Stem-loop(if miRNA) --AC          -     U      UUA
    UCUGGCCGCC GAAAA AUAGCC   U
    |||||||||| ||||| ||||||
    AGACCGGCGG CUUUU UAUUGG   U
CCAA          U     U      CUU
Stem-loop sequence ACUCUGGCCGCCGAAAAUAUAGCCUUAUUUUCGGUUAUUUUUUCUGGCGGCCAGAAACC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
NM_001175387.1
ncRNA:24   CCGAUAUAAAAGCCGCCGGUCUCA   1
  |||*|||**||||||||||||||*
targets:302   GGCCAUAGCUUCGGCGGCCAGAGC   325

3.0 Zea mays methyl esterase 10 (LOC100382663), mRNA NA coding protein psRNATarget
BT064995.1
ncRNA:24   CCGAUAUAAAAGCCGCCGGUCUCA   1
  |||*|||**||||||||||||||*
targets:302   GGCCAUAGCUUCGGCGGCCAGAGC   325

3.0 Zea mays full-length cDNA clone ZM_BFc0103A08 mRNA, complete cds NA coding protein psRNATarget
XM_008671062.2
ncRNA:24   CCGAUAUAAAAGCCGCCGGUCUCA   1
  |||-|*||*||||||||||||||*
targets:1279   GGC-AGAUAUUCGGCGGCCAGAGG   1301

3.0 PREDICTED: Zea mays hapless 8 (LOC103646329), mRNA NA coding protein psRNATarget