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BaseInfo

ncRNA ID novel_zma_miR6291
Species Zea mays
Class miRNA
Genome position Chr7:23957246-23957298 [-]
Reference genome RefGen_v4
Source SRR2647385
Length 24
Mature sequence(if miRNA) 1 - ACCGAACUGUCUGGUGCGCCCAUC - 24
Stem-loop(if miRNA) --CU               GUC     
    GGCGCACCGGACAGU   CGGUGG
    |||||||||||||||   |||||C
    CCGCGUGGUCUGUCA   GCCACG
CUAC               --A     
Stem-loop sequence CUGGCGCACCGGACAGUGUCCGGUGGCGCACCGAACUGUCUGGUGCGCCCAUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
LQ242135.1
ncRNA:24   CUACCCGCGUGGUCUGUCAAGCCA   1
  ||**|||||||||||||||*||||
targets:3   GAGUGGCGCACCAGACAGUCCGGU   26

1.5 Sequence 8130 from Patent EP2985353 NA coding protein psRNATarget
JB170466.1
ncRNA:24   CUACCCGCGUGGUCUGUCAAGCCA   1
  ||**|||||||||||||||*||||
targets:3   GAGUGGCGCACCAGACAGUCCGGU   26

1.5 Sequence 8130 from Patent EP2559767 NA coding protein psRNATarget
HI410005.1
ncRNA:24   CUACCCGCGUGGUCUGUCAAGCCA   1
  ||**|||||||||||||||*||||
targets:3   GAGUGGCGCACCAGACAGUCCGGU   26

1.5 Sequence 8130 from Patent EP2074227 NA coding protein psRNATarget
EZ101438.1
ncRNA:24   CUACCCGCGUGGUCUGUCAAGCCA   1
  |=||**|||||||||||||*||||
targets:36   GGUGCACGCACCAGACAGUCCGGU   59

2.5 TSA: Zea mays contig37094, mRNA sequence NA coding protein psRNATarget