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BaseInfo

ncRNA ID	novel_zma_miR6276
Species	Zea mays
Class	miRNA
Genome position	Chr6:120875079-120875201 [+]
Reference genome	RefGen_v4
Source	SRR2647385;SRR2647388;SRR1583943
Length	23
Mature sequence(if miRNA)	1 - CCGCCACUAGAAAUCAUAUUUCU - 23
Stem-loop(if miRNA)	--               A        G                         C  C        CCGCCACUAGAAAUC UAUUUCUA UGGCGGUUCCUUAAGAAAACCGCCA UA AAAUCA   ||||||||||||||| |||||||| ||||||||||||||||||||||||| || |||||U   GGCGGUGAUCUUUAG AUAAAGAU ACCGCCAAGGAAUUCUUUUGGCGGU AU UUUAGG UU               C        G                         C  C
Stem-loop sequence	CCGCCACUAGAAAUCAUAUUUCUAGUGGCGGUUCCUUAAGAAAACCGCCACUACAAAUCAUGGAUUUCUACUGGCGGUUUUCUUAAGGAACCGCCAGUAGAAAUACGAUUUCUAGUGGCGGUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
LQ235215.1	ncRNA:23   UCUUUAUACUAAAGAUCACCGCC   1   |||||||||||||||||||*||| targets:73   AGAAAUAUGAUUUCUAGUGUCGG   95 Target Full Sequence	1.5	Sequence 1210 from Patent EP2985353	NA	coding protein	psRNATarget
JB163546.1	ncRNA:23   UCUUUAUACUAAAGAUCACCGCC   1   |||||||||||||||||||*||| targets:73   AGAAAUAUGAUUUCUAGUGUCGG   95 Target Full Sequence	1.5	Sequence 1210 from Patent EP2559767	NA	coding protein	psRNATarget
HI403085.1	ncRNA:23   UCUUUAUACUAAAGAUCACCGCC   1   |||||||||||||||||||*||| targets:73   AGAAAUAUGAUUUCUAGUGUCGG   95 Target Full Sequence	1.5	Sequence 1210 from Patent EP2074227	NA	coding protein	psRNATarget
LQ235114.1	ncRNA:23   UCUUUA--UACUAAAGAUCACCGCC   1   |*||||--||||||||||||||||| targets:71   AAAAAUCCAUGAUUUCUAGUGGCGG   95 Target Full Sequence	2.5	Sequence 1109 from Patent EP2985353	NA	coding protein	psRNATarget
HI402984.1	ncRNA:23   UCUUUA--UACUAAAGAUCACCGCC   1   |*||||--||||||||||||||||| targets:71   AAAAAUCCAUGAUUUCUAGUGGCGG   95 Target Full Sequence	2.5	Sequence 1109 from Patent EP2074227	NA	coding protein	psRNATarget
JB163445.1	ncRNA:23   UCUUUA--UACUAAAGAUCACCGCC   1   |*||||--||||||||||||||||| targets:71   AAAAAUCCAUGAUUUCUAGUGGCGG   95 Target Full Sequence	2.5	Sequence 1109 from Patent EP2559767	NA	coding protein	psRNATarget
LQ235142.1	ncRNA:23   UCUUUAUACUAAAGAUCACCGCC   1   |*|||*||||||||||||||||| targets:1   AUAAAAAUGAUUUCUAGUGGCGG   23 Target Full Sequence	1.0	Sequence 1137 from Patent EP2985353	NA	coding protein	psRNATarget
JB163473.1	ncRNA:23   UCUUUAUACUAAAGAUCACCGCC   1   |*|||*||||||||||||||||| targets:1   AUAAAAAUGAUUUCUAGUGGCGG   23 Target Full Sequence	1.0	Sequence 1137 from Patent EP2559767	NA	coding protein	psRNATarget
HI403012.1	ncRNA:23   UCUUUAUACUAAAGAUCACCGCC   1   |*|||*||||||||||||||||| targets:1   AUAAAAAUGAUUUCUAGUGGCGG   23 Target Full Sequence	1.0	Sequence 1137 from Patent EP2074227	NA	coding protein	psRNATarget