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BaseInfo

ncRNA ID novel_zma_miR6266
Species Zea mays
Class miRNA
Genome position Chr6:36317119-36317169 [-]
Reference genome RefGen_v4
Source SRR2647385;SRR2647388
Length 24
Mature sequence(if miRNA) 1 - AUCUCGGCACCAUAGGCUAUGGCG - 24
Stem-loop(if miRNA) --             C       CA
  UCGUAGCCUAUGG GCCGAGG  A
  ||||||||||||| |||||||  U
  GGUAUCGGAUACC CGGCUCU  A
GC             A       AC
Stem-loop sequence UCGUAGCCUAUGGCGCCGAGGCAAUACAUCUCGGCACCAUAGGCUAUGGCG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_008654031.2
ncRNA:24   GCGGUAUCGGAUACCACGGCUCUA   1
  ||||||=|||||||||||||||=|
targets:1338   CGCCAUGGCCUAUGGUGCCGAGGU   1361

2.5 PREDICTED: Zea mays peroxidase 2 (LOC103632211), transcript variant X1, mRNA NA coding protein psRNATarget
XM_008666663.2
ncRNA:24   GCGGUAUCGGAUACCACGGCUCUA   1
  |||||||||||||||*||||||||
targets:871   CGCCAUAGCCUAUGGCGCCGAGAU   894

1.5 PREDICTED: Zea mays hypothetical protein (LOC103643463), mRNA NA coding protein psRNATarget