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BaseInfo

ncRNA ID	osa-miRf10223-npr
Species	Oryza sativa
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	23
Mature sequence(if miRNA)	NA - CGACGUCGACGAUGAUGUCGUCG - NA
Stem-loop(if miRNA)	CAU        -GAG  A        GU        GG   CGGCGGCG    CG CGACGUUG  GCUGCUGC ||   ||||||||    || ||||||||  |||||||U CC   GCUGCUGU    GC GCUGCAGC  UGACGACC   -UU        AGUA  A        --
Stem-loop sequence	GGCAUCGGCGGCGGAGCGACGACGUUGGUGCUGCUGCUCCAGCAGUCGACGUCGACGAUGAUGUCGUCGUUCC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK066180.1	ncRNA:23   GCUGCUGUAGUAGCAGCUGCAGC   1   ||||||||||||||||||||||| targets:982   CGACGACAUCAUCGUCGACGUCG   1004 Target Full Sequence	0.0	Oryza sativa Japonica Group cDNA clone:J013058H19, full insert sequence	NA	coding protein	psRNATarget
XM_015765673.1	ncRNA:23   GCUGCUGUAGUAGCAGCUGCAGC   1   ||||||||||||||||||||||| targets:791   CGACGACAUCAUCGUCGACGUCG   813 Target Full Sequence	0.0	PREDICTED: Oryza sativa Japonica Group transcription factor MYB59 (LOC4324302), mRNA	transcription factor MYB59(LOC4324302)	coding protein	psRNATarget
AK061823.1	ncRNA:23   GCUGCUGUAGUAGCAGCUGCAGC   1   ||||||||||||||||||||||| targets:523   CGACGACAUCAUCGUCGACGUCG   545 Target Full Sequence	0.0	Oryza sativa Japonica Group cDNA clone:001-040-C01, full insert sequence	NA	coding protein	psRNATarget
AY398581.1	ncRNA:23   GCUGCUGUAGUAGCAGCUGCAGC   1   ||||||||||||||||||||||| targets:528   CGACGACAUCAUCGUCGACGUCG   550 Target Full Sequence	0.0	Oryza sativa (indica cultivar-group) Myb factor protein (Myb) mRNA, complete cds, alternatively spliced	NA	coding protein	psRNATarget
AJ237661.1	ncRNA:23   GCUGCUGUAGUAGCAGCUGCAGC   1   **||||||||||||||||||||| targets:736   GAACGACAUCAUCGUCGACGUCG   758 Target Full Sequence	0.0	Oryza sativa mRNA for Myb factor protein, partial	NA	coding protein	psRNATarget
XM_015771079.1	ncRNA:23   GCUGCUGUAGUAGCAGCUGCAGC   1   *||||||=|||||||||=||||| targets:568   GGACGACGUCAUCGUCGGCGUCG   590 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group nucleolar and coiled-body phosphoprotein 1 (LOC4328309), mRNA	nucleolar and coiled-body phosphoprotein 1(LOC4328309)	coding protein	psRNATarget
JF969201.1	ncRNA:23   GCUGCUGUAGUAGCAGCUGCAGC   1   *||||||=|||||||||=||||| targets:508   GGACGACGUCAUCGUCGGCGUCG   530 Target Full Sequence	2.5	Oryza sativa Japonica Group clone KCB747G11 hypothetical protein mRNA, complete cds	NA	coding protein	psRNATarget
JF969204.1	ncRNA:23   GCUGCUGUAGUAGCAGCUGCAGC   1   *||||||=|||||||||=||||| targets:383   GGACGACGUCAUCGUCGGCGUCG   405 Target Full Sequence	2.5	Oryza sativa Japonica Group clone KCB798C03 hypothetical protein mRNA, complete cds	NA	coding protein	psRNATarget
XM_015767304.1	ncRNA:23   GCUGCUGUAGUAGCAGCUGCAGC   1   *||||||=|||||||||=||||| targets:354   GGACGACGUCAUCGUCGGCGUCG   376 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group basic leucine zipper 19 (LOC4328871), mRNA	basic leucine zipper 19(LOC4328871)	coding protein	psRNATarget
CT835312.1	ncRNA:23   GCUGCUGUAGUAGCAGCUGCAGC   1   *||||||=|||||||||=||||| targets:308   GGACGACGUCAUCGUCGGCGUCG   330 Target Full Sequence	2.5	Oryza sativa (indica cultivar-group) cDNA clone:OSIGCEA042A12, full insert sequence	NA	coding protein	psRNATarget
CT834500.1	ncRNA:23   GCUGCUGUAGUAGCAGCUGCAGC   1   =||=|||=||||||||||||||* targets:1762   UGAUGACGUCAUCGUCGACGUCA   1784 Target Full Sequence	2.0	Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA206G02, full insert sequence	NA	coding protein	psRNATarget
AK241582.1	ncRNA:23   GCUGCUGUA-GUAGCAGCUGCAGC   1   ||||||*||-|||||||||||||| targets:577   CGACGAGAUACAUCGUCGACGUCG   600 Target Full Sequence	3.0	Oryza sativa Japonica Group cDNA, clone: J065181M02, full insert sequence	NA	coding protein	psRNATarget
XM_015761198.1	ncRNA:23   GCUGCUGUA-GUAGCAGCUGCAGC   1   ||||||*||-|||||||||||||| targets:572   CGACGAGAUACAUCGUCGACGUCG   595 Target Full Sequence	3.0	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC9271655 (LOC9271655), mRNA	uncharacterized LOC9271655(LOC9271655)	coding protein	psRNATarget
XM_015782493.1	ncRNA:23   GCUGCUGUAGUAGCAGCUGCAGC   1   *||=||=||||||||||*||||| targets:1064   GGAUGAUAUCAUCGUCGUCGUCG   1086 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group putative RING-H2 finger protein ATL12 (LOC4339820), mRNA	putative RING-H2 finger protein ATL12(LOC4339820)	coding protein	psRNATarget
AK070817.1	ncRNA:23   GCUGCUGUAGUAGCAGCUGCAGC   1   *||=||=||||||||||*||||| targets:1001   GGAUGAUAUCAUCGUCGUCGUCG   1023 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:J023066I04, full insert sequence	NA	coding protein	psRNATarget
AF318581.1	ncRNA:23   GCUGCUGUAGUAGCAGCUGCAGC   1   ||*||*|=||||||||||||||| targets:669   CGUCGCCGUCAUCGUCGACGUCG   691 Target Full Sequence	2.0	Oryza sativa putative transcription factor OsGLK1 (Glk1) mRNA, complete cds	NA	coding protein	psRNATarget
XM_015779865.1	ncRNA:23   GCUGCUGUAGUAGCAGCUGCAGC   1   ||=-|||=||=|||||||||||| targets:135   CGG-GACGUCGUCGUCGACGUCG   156 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group triacylglycerol lipase 2-like (LOC107275667), transcript variant X1, mRNA	triacylglycerol lipase 2-like(LOC107275667)	coding protein	psRNATarget
XM_015779866.1	ncRNA:23   GCUGCUGUAGUAGCAGCUGCAGC   1   ||=-|||=||=|||||||||||| targets:135   CGG-GACGUCGUCGUCGACGUCG   156 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group triacylglycerol lipase 2-like (LOC107275667), transcript variant X2, mRNA	triacylglycerol lipase 2-like(LOC107275667)	coding protein	psRNATarget