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BaseInfo

ncRNA ID novel_zma_miR6259
Species Zea mays
Class miRNA
Genome position Chr6:146561684-146561799 [-]
Reference genome RefGen_v4
Source SRR2647385
Length 24
Mature sequence(if miRNA) 1 - ACGGUCUCCUCUAGGAAGUUAGAU - 24
Stem-loop(if miRNA) --               C  -                                  C  C
  CUAACUUCCUAGAGG AG UCGUAGGAAGUUAGCAUGGGCAGCUAACUUCCUA GA C
  ||||||||||||||| || |||||||||||||||||||||||||||||||||| || G
  GAUUGAAGGAUCUCC UC GGCAUCUUUCAAUCGUACCUGUUGAUUGAAGGAU CU C
UA               -  U                                  -  C
Stem-loop sequence CUAACUUCCUAGAGGCAGUCGUAGGAAGUUAGCAUGGGCAGCUAACUUCCUACGACCGCCUCUAGGAAGUUAGUUGUCCAUGCUAACUUUCUACGGUCUCCUCUAGGAAGUUAGAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EU949881.1
ncRNA:24   UAGAUUGAAGGAUCUCCUCUGGCA   1
  |*=||||||||||||||||*||||
targets:953   ACUUAACUUCCUAGAGGAGUCCGU   976

1.5 Zea mays clone 450754 mRNA sequence NA coding protein psRNATarget