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BaseInfo

ncRNA ID novel_zma_miR6248
Species Zea mays
Class miRNA
Genome position Chr5:74034493-74034694 [+]
Reference genome RefGen_v4
Source SRR2647385
Length 25
Mature sequence(if miRNA) 178 - GAUGUGUGUACAGUAUAAAAGGACU - 202
Stem-loop(if miRNA) --G              A   -   A                                               A      U                 U  A
   CCUUUUAUAUUGUA ACA AUC CAGGCGGAUUUUUAGAAAAACCGUUUGUGAUAUAUAACAUCACAUGC CUUUUU AUUCCGACCGCCUGUGA AG U
   |||||||||||||| ||| ||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||| || U
   GGAAAAUAUGACAU UGU UAG GUCCGCCUAAAAAUCUUUUUGGCGAAUACUAUAUAUUGUAGUGUACG GAAAAA UAAGGCUGGCGGACACU UC A
UCA              G   G   C                                               C      -                 -  A
Stem-loop sequence GCCUUUUAUAUUGUAAACAAUCACAGGCGGAUUUUUAGAAAAACCGUUUGUGAUAUAUAACAUCACAUGCACUUUUUUAUUCCGACCGCCUGUGAUAGAUUAACUUCACAGGCGGUCGGAAUAAAAAGCGCAUGUGAUGUUAUAUAUCAUAAGCGGUUUUUCUAAAAAUCCGCCUGCGAUGUGUGUACAGUAUAAAAGGACU