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BaseInfo

ncRNA ID novel_zma_miR6236
Species Zea mays
Class miRNA
Genome position Chr5:29478330-29478392 [+]
Reference genome RefGen_v4
Source SRR2647385
Length 20
Mature sequence(if miRNA) 1 - GUGUUUGGCAUGCUCUGGCU - 20
Stem-loop(if miRNA) --G           -      ---CU      U
   UGUUUGGCAUG CUCUGG     AGCUCC C
   ||||||||||| ||||||     |||||| C
   ACAAACCGUAC GAGAUC     UUGAGG U
CGG           C      UCUUU      U
Stem-loop sequence GUGUUUGGCAUGCUCUGGCUAGCUCCUCCUUGGAGUUUUUCUCUAGAGCCAUGCCAAACAGGC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT084823.2
ncRNA:20   UCGGUCUCGUACGGUUUGUG   1
  =|||||||||||||||||||
targets:343   GGCCAGAGCAUGCCAAACAC   362

0.0 Zea mays full-length cDNA clone ZM_BFb0187L14 mRNA, complete cds NA coding protein psRNATarget
BT067136.2
ncRNA:20   UCGGUCUCGUACGGUUUGUG   1
  =|||||=|||||||||||||
targets:680   GGCCAGGGCAUGCCAAACAC   699

1.0 Zea mays full-length cDNA clone ZM_BFb0206F19 mRNA, complete cds NA coding protein psRNATarget