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BaseInfo

ncRNA ID	novel_zma_miR6234
Species	Zea mays
Class	miRNA
Genome position	Chr7:11078858-11078905 [+]
Reference genome	RefGen_v4
Source	SRR1618883
Length	24
Mature sequence(if miRNA)	25 - CGGCACUCGGCAAAGGCUCGGAUU - 48
Stem-loop(if miRNA)	--   --U               AU   UCC   UCUUUGCCGAGUGCC  U   |||   |||||||||||||||   AGG   GGAAACGGCUCACGG  U UU   CUC               CU
Stem-loop sequence	UCCUUCUUUGCCGAGUGCCAUUUUCGGCACUCGGCAAAGGCUCGGAUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EU962802.1	ncRNA:24   UUAGGCUCGGAAACGGCUCACGGC   1   ||||||=|*||||||||||||||| targets:820   AAUCCGGGACUUUGCCGAGUGCCG   843 Target Full Sequence	2.0	Zea mays clone 245661 hypothetical protein mRNA, complete cds	NA	coding protein	psRNATarget
HI406725.1	ncRNA:22   AGGCUCGGAAACGGCUCACGGC   1   *=*||||||||||||||||=|* targets:1   AUGGAGCCUUUGCCGAGUGUCA   22 Target Full Sequence	2.5	Sequence 4850 from Patent EP2074227	NA	coding protein	psRNATarget
LQ238855.1	ncRNA:22   AGGCUCGGAAACGGCUCACGGC   1   *=*||||||||||||||||=|* targets:1   AUGGAGCCUUUGCCGAGUGUCA   22 Target Full Sequence	2.5	Sequence 4850 from Patent EP2985353	NA	coding protein	psRNATarget
JB167186.1	ncRNA:22   AGGCUCGGAAACGGCUCACGGC   1   *=*||||||||||||||||=|* targets:1   AUGGAGCCUUUGCCGAGUGUCA   22 Target Full Sequence	2.5	Sequence 4850 from Patent EP2559767	NA	coding protein	psRNATarget
LQ238902.1	ncRNA:24   UUAGGCUCGGAAACGGCUCACGGC   1   *=*|*|||*||||||||||||||| targets:2   CGACAGAGACUUUGCCGAGUGCCG   25 Target Full Sequence	1.0	Sequence 4897 from Patent EP2985353	NA	coding protein	psRNATarget
HI406772.1	ncRNA:24   UUAGGCUCGGAAACGGCUCACGGC   1   *=*|*|||*||||||||||||||| targets:2   CGACAGAGACUUUGCCGAGUGCCG   25 Target Full Sequence	1.0	Sequence 4897 from Patent EP2074227	NA	coding protein	psRNATarget
JB167233.1	ncRNA:24   UUAGGCUCGGAAACGGCUCACGGC   1   *=*|*|||*||||||||||||||| targets:2   CGACAGAGACUUUGCCGAGUGCCG   25 Target Full Sequence	1.0	Sequence 4897 from Patent EP2559767	NA	coding protein	psRNATarget
XM_020543430.1	ncRNA:24   UUAGGCUCG-GAAACGGCUCACGGC   1   ||---||||-||||||||||||||* targets:1172   AA---GAGCUCUUUGCCGAGUGCCC   1193 Target Full Sequence	3.0	PREDICTED: Zea mays protein enabled homolog (LOC103636633), mRNA	NA	coding protein	psRNATarget
JB170493.1	ncRNA:24   UUAGGCUCGGAAACGGCUCACGGC   1   *|****||*||||||||||||||| targets:4   CAAAGAAGGCUUUGCCGAGUGCCG   27 Target Full Sequence	2.0	Sequence 8157 from Patent EP2559767	NA	coding protein	psRNATarget
LQ242162.1	ncRNA:24   UUAGGCUCGGAAACGGCUCACGGC   1   *|****||*||||||||||||||| targets:4   CAAAGAAGGCUUUGCCGAGUGCCG   27 Target Full Sequence	2.0	Sequence 8157 from Patent EP2985353	NA	coding protein	psRNATarget
HI410032.1	ncRNA:24   UUAGGCUCGGAAACGGCUCACGGC   1   *|****||*||||||||||||||| targets:4   CAAAGAAGGCUUUGCCGAGUGCCG   27 Target Full Sequence	2.0	Sequence 8157 from Patent EP2074227	NA	coding protein	psRNATarget