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BaseInfo

ncRNA ID	novel_zma_miR6230
Species	Zea mays
Class	miRNA
Genome position	Chr1:13871415-13871500 [+]
Reference genome	RefGen_v4
Source	SRR1618883
Length	23
Mature sequence(if miRNA)	64 - UUCAAUCCUCUCGGGAUCCCCUU - 86
Stem-loop(if miRNA)	--C                C            G        UA    GGGAUCCCGGGAGGAU GGAGGGGAUUGA GGGGAAAU  G    |||||||||||||||| |||||||||||| ||||||||    CCCUAGGGCUCUCCUA CUUCCCCUAACU CCCCUUUA  U UUC                A            G        UU
Stem-loop sequence	CGGGAUCCCGGGAGGAUCGGAGGGGAUUGAGGGGGAAAUUAGUUUAUUUCCCCGUCAAUCCCCUUCAAUCCUCUCGGGAUCCCCUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
HI403018.1	ncRNA:23   UUCCCCUAGGGCUCUCCUAACUU   1   ||||||||||||=|||||||||| targets:4   AAGGGGAUCCCGGGAGGAUUGAA   26 Target Full Sequence	1.5	Sequence 1143 from Patent EP2074227	NA	coding protein	psRNATarget
LQ235148.1	ncRNA:23   UUCCCCUAGGGCUCUCCUAACUU   1   ||||||||||||=|||||||||| targets:4   AAGGGGAUCCCGGGAGGAUUGAA   26 Target Full Sequence	1.5	Sequence 1143 from Patent EP2985353	NA	coding protein	psRNATarget
JB163479.1	ncRNA:23   UUCCCCUAGGGCUCUCCUAACUU   1   ||||||||||||=|||||||||| targets:4   AAGGGGAUCCCGGGAGGAUUGAA   26 Target Full Sequence	1.5	Sequence 1143 from Patent EP2559767	NA	coding protein	psRNATarget
XM_020551688.1	ncRNA:23   UUCCCCUAGGGCUCUCCUAACUU   1   |||||||||||||||||||||=| targets:2100   AAGGGGAUCCCGAGAGGAUUGGA   2122 Target Full Sequence	1.5	PREDICTED: Zea mays hypothetical protein (LOC100383632), transcript variant X1, mRNA	NA	coding protein	psRNATarget
BT088155.1	ncRNA:23   UUCCCCUAGGGCUCUCCUAACUU   1   |||*|||||*||=|||||||||| targets:1423   AAGUGGAUCACGGGAGGAUUGAA   1445 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFc0038D09 mRNA, complete cds	NA	coding protein	psRNATarget