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BaseInfo

ncRNA ID	osa-miRf10220-npr
Species	Oryza sativa
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	22
Mature sequence(if miRNA)	NA - UAGGAUGUGUCUCAUCCACCCA - NA
Stem-loop(if miRNA)	-AA          C A   U             AAUU       A    GG    GGCUUUUGGG G AUG GACACAUCCUAGU    UGAAUCU GAUA  C    |||||||||| | ||| |||||||||||||    ||||||| ||||    UCGAAAACCC C UAC CUGUGUAGGAUCA    GCUUAGA CUGU  U UUC          A C   U             CGAU       C    AC
Stem-loop sequence	AAGGCUUUUGGGCGAAUGUGACACAUCCUAGUAAUUUGAAUCUAGAUAGGCUCAUGUCCAGAUUCGUAGCACUAGGAUGUGUCUCAUCCACCCAAAAGCUCUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_015761638.1	ncRNA:22   ACCCACCUACUCUGUGUAGGAU   1   |||*||||||=||||||||||| targets:3894   UGGUUGGAUGGGACACAUCCUA   3915 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group putative receptor protein kinase ZmPK1 (LOC107278048), mRNA	putative receptor protein kinase ZmPK1(LOC107278048)	coding protein	psRNATarget
HI403499.1	ncRNA:21   CCCACCUACUCUGUGUAGGAU   1   |*|||||||=||||||||||| targets:1   GAGUGGAUGGGACACAUCCUA   21 Target Full Sequence	1.5	Sequence 1624 from Patent EP2074227	NA	coding protein	psRNATarget
JB163960.1	ncRNA:21   CCCACCUACUCUGUGUAGGAU   1   |*|||||||=||||||||||| targets:1   GAGUGGAUGGGACACAUCCUA   21 Target Full Sequence	1.5	Sequence 1624 from Patent EP2559767	NA	coding protein	psRNATarget
LQ235629.1	ncRNA:21   CCCACCUACUCUGUGUAGGAU   1   |*|||||||=||||||||||| targets:1   GAGUGGAUGGGACACAUCCUA   21 Target Full Sequence	1.5	Sequence 1624 from Patent EP2985353	NA	coding protein	psRNATarget
XM_015760423.1	ncRNA:22   ACCCACCUACUCUGUGUAGGAU   1   ||||||||*|*||||||||||| targets:1346   UGGGUGGACGUGACACAUCCUA   1367 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group cysteine-rich receptor-like protein kinase 37 (LOC107279291), transcript variant X2, mRNA	cysteine-rich receptor-like protein kinase 37(LOC107279291)	coding protein	psRNATarget
XM_015760422.1	ncRNA:22   ACCCACCUACUCUGUGUAGGAU   1   ||||||||*|*||||||||||| targets:1362   UGGGUGGACGUGACACAUCCUA   1383 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group cysteine-rich receptor-like protein kinase 37 (LOC107279291), transcript variant X1, mRNA	cysteine-rich receptor-like protein kinase 37(LOC107279291)	coding protein	psRNATarget
XM_015760424.1	ncRNA:22   ACCCACCUACUCUGUGUAGGAU   1   ||||||||*|*||||||||||| targets:1446   UGGGUGGACGUGACACAUCCUA   1467 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group cysteine-rich receptor-like protein kinase 37 (LOC107279291), transcript variant X3, mRNA	cysteine-rich receptor-like protein kinase 37(LOC107279291)	coding protein	psRNATarget
AK288866.1	ncRNA:22   ACCCACCUACUCUGUGUAGGAU   1   ****|||||||||||||||=|| targets:1885   GUACUGGAUGAGACACAUCUUA   1906 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090078B06, full insert sequence	NA	coding protein	psRNATarget
AK110894.1	ncRNA:22   ACCCACCUACUCUGUGUAGGAU   1   ||**|||||*|||||||||||| targets:1306   UGAUUGGAUAAGACACAUCCUA   1327 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:002-173-A04, full insert sequence	NA	coding protein	psRNATarget