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BaseInfo

ncRNA ID novel_zma_miR6227
Species Zea mays
Class miRNA
Genome position Chr7:109725361-109725410 [+]
Reference genome RefGen_v4
Source SRR1618883;SRR4237222
Length 22
Mature sequence(if miRNA) 1 - CAGGGUCCGGACUGUCCGCGCC - 22
Stem-loop(if miRNA) --CAG    -            GCC
     GGUC CGGACUGUCCGC   A
     |||| ||||||||||||   U
     CCAG GCCUGGCAGGUG   C
ACCUG    C            AUC
Stem-loop sequence CAGGGUCCGGACUGUCCGCGCCAUCCUAGUGGACGGUCCGCGACCGUCCA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_020540221.1
ncRNA:22   CCGCGCCUGUCAGGCCUGGGAC   1
  **||||||||||||||*||||*
targets:93   CUCGCGGACAGUCCGGCCCCUA   114

2.5 PREDICTED: Zea mays uncharacterized LOC103630887 (LOC103630887), mRNA NA coding protein psRNATarget