ncRNA ID | novel_zma_miR6214 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr4:16678937-16679076 [-] |
Reference genome | RefGen_v4 |
Source | SRR2647385 |
Length | 24 |
Mature sequence(if miRNA) | 117 - UAGGGUUUCCUGCCUAACGGCCGG - 140 |
Stem-loop(if miRNA) |
--       --    G  UA    CCGGAC     G GC           AU      C    G   AGG     - G   UAGGGUU  UCCU CC  ACGG      GGUCC C  CCUGGGGGCGA  GGUCCA GCGU UGC   GGCGG C G   |||||||  |||| ||  ||||      ||||| |  |||||||||||  |||||| |||| |||   ||||| |   AUCCUAG  AGGA GG  UGCC      CCAGG G  GGGCCCUCGCU  CUAGGU CGCG GCG   UCGCU G A GG       AG    G  GC    ------     - -A           --      C    -   --G     A A |
Stem-loop sequence | UAGGGUUUCCUGCCUAACGGCCGGACGGUCCGCGCCCUGGGGGCGAAUGGUCCACGCGUGUGCAGGGGCGGCGGAAGAUCGCUGGCGGCGCCUGGAUCUCGCUCCCGGGAGGGACCCCGUCGGGGAGGAGAGAUCCUAGG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
EZ073491.1 |
|
2.5 | TSA: Zea mays contig09128, mRNA sequence | NA | coding protein | psRNATarget |