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BaseInfo

ncRNA ID novel_zma_miR6210
Species Zea mays
Class miRNA
Genome position Chr4:52871966-52872046 [-]
Reference genome RefGen_v4
Source SRR2647385
Length 24
Mature sequence(if miRNA) 1 - UCCUUCUCUAUGGAUCCUCUCCAU - 24
Stem-loop(if miRNA) --    GA         GA              C      A
  GGAG  GAUUUAUGG  GAGGAAUCUUCUCG UAUUUA U
  ||||  |||||||||  |||||||||||||| ||||||
  CCUC  CUAGGUAUC  UUCCUUAGGAGAGC AUAAGU U
UA    UC         UC              -      U
Stem-loop sequence GGAGGAGAUUUAUGGGAGAGGAAUCUUCUCGCUAUUUAAUUUUGAAUACGAGAGGAUUCCUUCUCUAUGGAUCCUCUCCAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EU941904.1
ncRNA:24   UACCUCUCCUAGGUAUCUCUUCCU   1
  **|*||=||||||||=||||||||
targets:708   UCGAAGGGGAUCCAUGGAGAAGGA   731

2.5 Zea mays clone 1472585 mRNA sequence NA coding protein psRNATarget