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BaseInfo

ncRNA ID	novel_zma_miR6208
Species	Zea mays
Class	miRNA
Genome position	Chr4:112439469-112439569 [-]
Reference genome	RefGen_v4
Source	SRR2647385
Length	23
Mature sequence(if miRNA)	79 - CGGGUUUACCCGGUAUUUCGGGU - 101
Stem-loop(if miRNA)	--     UU          U     -       UUC    UUUUAAUAU     -  U   CGGGU  ACCCGGUAUU CGGGU CGGGUUU   GGGU         UUCGG GU U   |||||  |||||||||| ||||| |||||||   ||||         ||||| || U   GCCCA  UGGGCUAUAA GCCCA GCUCAAA   CCCG         AAGCU CA A AU     --          U     U       ---    ---------     A  A
Stem-loop sequence	CGGGUUUACCCGGUAUUUCGGGUCGGGUUUUUCGGGUUUUUAAUAUUUCGGGUUUUAAACAUCGAAGCCCAAACUCGUACCCGUAAUAUCGGGUACCCGUA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EU944440.1	ncRNA:23   UGGGCUUUAUGGCCCAUUUGGGC   1   |||||||||*=|||||||||||| targets:646   ACCCGAAAUUUCGGGUAAACCCG   668 Target Full Sequence	2.5	Zea mays clone 218592 mRNA sequence	NA	coding protein	psRNATarget
NM_001154449.1	ncRNA:23   UGGGCUUUAUGGCCCAUUUGGGC   1   |||||||||*=|||||||||||| targets:921   ACCCGAAAUUUCGGGUAAACCCG   943 Target Full Sequence	2.5	Zea mays glyoxalase/bleomycin resistance protein/dioxygenase (LOC100281531), mRNA	NA	coding protein	psRNATarget
EU957014.1	ncRNA:23   UGGGCUUUAUGGCCCAUUUGGGC   1   |||||||||*=|||||||||||| targets:921   ACCCGAAAUUUCGGGUAAACCCG   943 Target Full Sequence	2.5	Zea mays clone 1580507 glyoxalase/bleomycin resistance protein/dioxygenase mRNA, complete cds	NA	coding protein	psRNATarget
XM_020546661.1	ncRNA:23   UGGGCUUUAUGGCCCAUUUGGGC   1   |||||||||*=|||||||||||| targets:364   ACCCGAAAUUUCGGGUAAACCCG   386 Target Full Sequence	2.5	PREDICTED: Zea mays ribonuclease E/G-like protein, chloroplastic (LOC103643177), transcript variant X1, mRNA	NA	coding protein	psRNATarget