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BaseInfo

ncRNA ID novel_zma_miR6200
Species Zea mays
Class miRNA
Genome position Chr4:168190087-168190124 [-]
Reference genome RefGen_v4
Source SRR2647385
Length 19
Mature sequence(if miRNA) 20 - AGUAUAACGAGCCGAGCCA - 38
Stem-loop(if miRNA) -- G           G   
  A UAUAACGAGCC AGCC
  | ||||||||||| |||A
  U AUAUUGCUCGG UCGA
AA G           -   
Stem-loop sequence AGUAUAACGAGCCGAGCCAAGCUGGCUCGUUAUAGUAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT041133.1
ncRNA:19   ACCGAGCCGAGCAAUAUGA   1
  *||||||||||||||||||
targets:1494   CGGCUCGGCUCGUUAUACU   1512

1.0 Zea mays full-length cDNA clone ZM_BFc0178D15 mRNA, complete cds NA coding protein psRNATarget
NM_001147875.1
ncRNA:19   ACCGAGCCGAGCAAUAUGA   1
  *||||||||||||||||||
targets:1494   CGGCUCGGCUCGUUAUACU   1512

1.0 Zea mays uncharacterized LOC100273438 (LOC100273438), mRNA NA coding protein psRNATarget