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BaseInfo

ncRNA ID novel_zma_miR6192
Species Zea mays
Class miRNA
Genome position Chr4:18290200-18290273 [+]
Reference genome RefGen_v4
Source SRR2647385
Length 24
Mature sequence(if miRNA) 51 - GGUUUUCUAACCGUGUCUGGUGGG - 74
Stem-loop(if miRNA) --G       U   A              -C  G GA
   GCCGGGC CGG UAGAAAAUCGAGCC  GC G  U
   ||||||| ||| ||||||||||||||  || |  U
   UGGUCUG GCC AUCUUUUGGCUUGG  CG C  A
GGG       U   A              CC  G AG
Stem-loop sequence GGCCGGGCUCGGAUAGAAAAUCGAGCCCGCGGGAUUAGACGGCCCGGUUCGGUUUUCUAACCGUGUCUGGUGGG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_008682038.1
ncRNA:24   GGGUGGUCUGUGCCAAUCUUUUGG   1
  |||=||||=|||||||||||||||
targets:269   CCCGCCAGGCACGGUUAGAAAACC   292

1.0 PREDICTED: Zea mays ras-related protein Rab-36-like (LOC103655257), mRNA NA coding protein psRNATarget
EU957132.1
ncRNA:24   GGGUGGUCUGUGCCAAUCUUUUGG   1
  |=|=|||||||||||||||||||=
targets:488   CUCGCCAGACACGGUUAGAAAACU   511

1.0 Zea mays clone 1583769 mRNA sequence NA coding protein psRNATarget