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BaseInfo

ncRNA ID	novel_zma_miR6187
Species	Zea mays
Class	miRNA
Genome position	Chr4:16788426-16788547 [+]
Reference genome	RefGen_v4
Source	SRR2647385
Length	24
Mature sequence(if miRNA)	99 - CGGGAUCUCUGAUCACCAAAUCAG - 122
Stem-loop(if miRNA)	--               C     A           A  AU              U   AAA   GGUUUGGUGGUCAGG AUCCC AGAGGAUCCAU GG  AGGAAUCCCCUUGU AUU   A   ||||||||||||||| ||||| ||||||||||| ||  |||||||||||||| |||   CUAAACCACUAGUCU UAGGG UCUCCUAGGUA CC  UCUUUAGGGGAACG UAA   A GA               C     C           C  CC              U   GUU
Stem-loop sequence	GGUUUGGUGGUCAGGCAUCCCAAGAGGAUCCAUAGGAUAGGAAUCCCCUUGUUAUUAAAAAUUGAAUUGCAAGGGGAUUUCUCCCCCAUGGAUCCUCUCGGGAUCUCUGAUCACCAAAUCAG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EZ056613.1	ncRNA:24   GACUAAACCACUAGUCUCUAGGGC   1   |||||||||||||=|||||||||* targets:66   CUGAUUUGGUGAUUAGAGAUCCCU   89 Target Full Sequence	2.5	TSA: Zea mays contig57735, mRNA sequence	NA	coding protein	psRNATarget
EZ095368.1	ncRNA:24   GACUAAACCACUAGUCUCUAGGGC   1   =||||||||||||||||||||*|| targets:36   UUGAUUUGGUGAUCAGAGAUCACG   59 Target Full Sequence	1.5	TSA: Zea mays contig31021, mRNA sequence	NA	coding protein	psRNATarget
XM_008667073.2	ncRNA:24   GACUAAACCACUAGUCUCUAGGGC   1   =||||||||||||||||||||*|| targets:3291   UUGAUUUGGUGAUCAGAGAUCACG   3314 Target Full Sequence	1.5	PREDICTED: Zea mays exportin-2 (LOC103643902), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_008667075.2	ncRNA:24   GACUAAACCACUAGUCUCUAGGGC   1   =||||||||||||||||||||*|| targets:3307   UUGAUUUGGUGAUCAGAGAUCACG   3330 Target Full Sequence	1.5	PREDICTED: Zea mays exportin-2 (LOC103643902), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_008667074.2	ncRNA:24   GACUAAACCACUAGUCUCUAGGGC   1   =||||||||||||||||||||*|| targets:3311   UUGAUUUGGUGAUCAGAGAUCACG   3334 Target Full Sequence	1.5	PREDICTED: Zea mays exportin-2 (LOC103643902), transcript variant X2, mRNA	NA	coding protein	psRNATarget