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BaseInfo

ncRNA ID	novel_zma_miR6182
Species	Zea mays
Class	miRNA
Genome position	Chr3:127946894-127946955 [+]
Reference genome	RefGen_v4
Source	SRR2647385
Length	23
Mature sequence(if miRNA)	40 - UGAUUAUUUCAACUGUGGUUGUU - 62
Stem-loop(if miRNA)	-UAU      U         -----UG           AUUAUA GUUGAAAUA       GUGAUAU     |||||| |||||||||       ||||||C     UGGUGU CAACUUUAU       UACUAUU UUGU      -         UAGUGUA
Stem-loop sequence	UAUAUUAUAUGUUGAAAUAUGGUGAUAUCUUAUCAUAUGUGAUUAUUUCAACUGUGGUUGUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
BT068217.1	ncRNA:23   UUGUUGGUGUCAACUUUAUUAGU   1   |||||||||||||*||||||||| targets:973   AACAACCACAGUUCAAAUAAUCA   995 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFb0082E04 mRNA, complete cds	NA	coding protein	psRNATarget
XM_020549665.1	ncRNA:23   UUGUUGGUGUCAACUUUAUUAGU   1   **|||*||||||||=|||||||| targets:1304   CUCAAACACAGUUGGAAUAAUCA   1326 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC100279215 (LOC100279215), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_020549666.1	ncRNA:23   UUGUUGGUGUCAACUUUAUUAGU   1   **|||*||||||||=|||||||| targets:1296   CUCAAACACAGUUGGAAUAAUCA   1318 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC100279215 (LOC100279215), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_020549667.1	ncRNA:23   UUGUUGGUGUCAACUUUAUUAGU   1   **|||*||||||||=|||||||| targets:1113   CUCAAACACAGUUGGAAUAAUCA   1135 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC100279215 (LOC100279215), transcript variant X3, mRNA	NA	coding protein	psRNATarget
EU945598.1	ncRNA:23   UUGUUGGUGUCAACUUUAUUAGU   1   **|||*||||||||=|||||||| targets:1235   CUCAAACACAGUUGGAAUAAUCA   1257 Target Full Sequence	2.5	Zea mays clone 278983 mRNA sequence	NA	coding protein	psRNATarget