ncRNA ID | novel_zma_miR6174 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr3:16473818-16473930 [-] |
Reference genome | RefGen_v4 |
Source | SRR2647385 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AGAUCUGUGUUGGGCAAUUCAACC - 24 |
Stem-loop(if miRNA) |
--     ---        UU       UU       AAG   GAAC      CACC         UUGAA   CCCAACAC  GGUCUUU  AUUGGCU   AGU    CUUUGG    UGUAUAA   |||||   ||||||||  |||||||  |||||||   |||    ||||||    ||||||C   AACUU   GGGUUGUG  CUAGAAA  UGAUUGA   UCA    GAGAUC    ACAUAUU CC     AAC        -U       CC       ---   -AAC      ----       |
Stem-loop sequence | UUGAACCCAACACUUGGUCUUUUUAUUGGCUAAGAGUGAACCUUUGGCACCUGUAUAACUUAUACACUAGAGCAAACUAGUUAGUCCAAAGAUCUGUGUUGGGCAAUUCAACC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
EU948808.1 |
|
1.5 | Zea mays clone 385792 mRNA sequence | NA | coding protein | psRNATarget |