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BaseInfo

ncRNA ID	novel_zma_miR6115
Species	Zea mays
Class	miRNA
Genome position	Chr10:38376019-38376116 [-]
Reference genome	RefGen_v4
Source	SRR2647343
Length	23
Mature sequence(if miRNA)	76 - CGCGGAAUUUUGGUUGUGUAACC - 98
Stem-loop(if miRNA)	--              U         A            -     - AUG   CGCGGAAUUUUGGU GUGUAACCC GUUGUUCUCCAA CACAC C   U   |||||||||||||| ||||||||| |||||||||||| ||||| |   GCGUUUUAAAGCCG CGUAUUGGG CGACGAGAGGUU GUGUG G   U CG              U         G            C     C AAC
Stem-loop sequence	CGCGGAAUUUUGGUUGUGUAACCCAGUUGUUCUCCAACACACCAUGUUCAAGCGUGUGCUUGGAGAGCAGCGGGGUUAUGCUGCCGAAAUUUUGCGGC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
BT061451.1	ncRNA:23   CCAAUGUGUUGGUUUUAAGGCGC   1   |***|||*||||||||||||||* targets:712   GAGAACAGAACCAAAAUUCCGCC   734 Target Full Sequence	2.0	Zea mays full-length cDNA clone ZM_BFb0147N16 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001174341.1	ncRNA:23   CCAAUGUGUUGGUUUUAAGGCGC   1   |***|||*||||||||||||||* targets:712   GAGAACAGAACCAAAAUUCCGCC   734 Target Full Sequence	2.0	Zea mays Kinesin KP1 (LOC100381510), mRNA	NA	coding protein	psRNATarget
EU952146.1	ncRNA:23   CCAAUGUGUUGGUUUUAAGGCGC   1   |***|||*||||||||||||||* targets:1196   GAGAACAGAACCAAAAUUCCGCC   1218 Target Full Sequence	2.0	Zea mays clone 1212931 mRNA sequence	NA	coding protein	psRNATarget
XM_008670039.2	ncRNA:23   CCAAUGUGUUGGUUUUAAGGCGC   1   |***|||*||||||||||||||* targets:2870   GAGAACAGAACCAAAAUUCCGCC   2892 Target Full Sequence	2.0	PREDICTED: Zea mays Kinesin KP1 (LOC100381510), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_020547829.1	ncRNA:23   CCAAUGUGUUGGUUUUAAGGCGC   1   |***|||*||||||||||||||* targets:2956   GAGAACAGAACCAAAAUUCCGCC   2978 Target Full Sequence	2.0	PREDICTED: Zea mays Kinesin KP1 (LOC100381510), transcript variant X1, mRNA	NA	coding protein	psRNATarget