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BaseInfo

ncRNA ID novel_zma_miR6111
Species Zea mays
Class miRNA
Genome position Chr2:119539009-119539184 [+]
Reference genome RefGen_v4
Source SRR2647343;SRR2647386;SRR2647389
Length 24
Mature sequence(if miRNA) 153 - AAUAUCCGCUUGUGAUUGUUUACA - 176
Stem-loop(if miRNA) --UAC   C                           C                      UG      -                 -  U
     ACA AUCACAGGUGGAUAUUUAGAAAAACCG CUGUGAUAGAUAACAUCACAGG  GUUUUU AUUUCGACCGCCUGUGA AG U
     ||| ||||||||||||||||||||||||||| ||||||||||||||||||||||  |||||| ||||||||||||||||| || A
     UGU UAGUGUUCGCCUAUAAAUCUUUUUGGC GACACUAUCUAUUGUAGUGUCC  CAAAAA UAAGGCUGGCGGAUACU UC A
ACAUU   -                           A                      GU      A                 A  U
Stem-loop sequence UACACACAUCACAGGUGGAUAUUUAGAAAAACCGCCUGUGAUAGAUAACAUCACAGGUGGUUUUUAUUUCGACCGCCUGUGAAGUUAAUCUAUCAUAGGCGGUCGGAAUAAAAAACUGCCUGUGAUGUUAUCUAUCACAGACGGUUUUUCUAAAUAUCCGCUUGUGAUUGUUUACA