ncRNA ID | novel_zma_miR6111 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr2:119539009-119539184 [+] |
Reference genome | RefGen_v4 |
Source | SRR2647343;SRR2647386;SRR2647389 |
Length | 24 |
Mature sequence(if miRNA) | 153 - AAUAUCCGCUUGUGAUUGUUUACA - 176 |
Stem-loop(if miRNA) |
--UAC   C                           C                      UG      -                 -  U      ACA AUCACAGGUGGAUAUUUAGAAAAACCG CUGUGAUAGAUAACAUCACAGG  GUUUUU AUUUCGACCGCCUGUGA AG U      ||| ||||||||||||||||||||||||||| ||||||||||||||||||||||  |||||| ||||||||||||||||| || A      UGU UAGUGUUCGCCUAUAAAUCUUUUUGGC GACACUAUCUAUUGUAGUGUCC  CAAAAA UAAGGCUGGCGGAUACU UC A ACAUU   -                           A                      GU      A                 A  U |
Stem-loop sequence | UACACACAUCACAGGUGGAUAUUUAGAAAAACCGCCUGUGAUAGAUAACAUCACAGGUGGUUUUUAUUUCGACCGCCUGUGAAGUUAAUCUAUCAUAGGCGGUCGGAAUAAAAAACUGCCUGUGAUGUUAUCUAUCACAGACGGUUUUUCUAAAUAUCCGCUUGUGAUUGUUUACA |