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BaseInfo

ncRNA ID novel_zma_miR6107
Species Zea mays
Class miRNA
Genome position Chr2:29459122-29459224 [-]
Reference genome RefGen_v4
Source SRR2647343;SRR2647385;SRR2647387;SRR2647389
Length 21
Mature sequence(if miRNA) 1 - UUGGCUUCUCUGUUUUGGAGA - 21
Stem-loop(if miRNA) --         CCCU          -A    AUUG     A  GA    GAGAG
  UUCAGAGCA    GAAGCCAACG  GAUA    UCAUU UA  CGAA     A
  |||||||||    ||||||||||  ||||    ||||| ||  ||||
  AGGUUUUGU    CUUCGGUUGC  UUGU    GGUAA GU  GCUU     A
AG         --CU          GG    -GUA     A  -A    AGGGG
Stem-loop sequence UUCAGAGCACCCUGAAGCCAACGAGAUAAUUGUCAUUAUAGACGAAGAGAGAAGGGGAUUCGAUGAAAUGGAUGUGUUGGCGUUGGCUUCUCUGUUUUGGAGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_020545537.1
ncRNA:21   AGAGGUUUUGUCUCUUCGGUU   1
  ||||||||*||||||||||||
targets:1782   UCUCCAAAUCAGAGAAGCCAA   1802

1.5 PREDICTED: Zea mays uncharacterized LOC103642960 (LOC103642960), mRNA NA coding protein psRNATarget