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BaseInfo

ncRNA ID	osa-miRf10207-npr
Species	Oryza sativa
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	20
Mature sequence(if miRNA)	NA - GACGAGUGGUCAAACAGCGC - NA
Stem-loop(if miRNA)	U        A                               U   C    ---------------AUAAAA   GAAAAGUUGUGCUUAA  UUGCUUGC CUGUUUGAUCACUCGUCUUAUUCAAAAAAAU GUG AAAU                     AAC                A  |||||||| ||||||||||||||||||||||||||||||| ||| ||||                     |||  AACGAGCG GACAAACUGGUGAGCAGAAUAAGUUUUUUUA CAC UUUA                     AUG                G A        C                               -   -    AUAAUAAAUAAAAAAAACUGA   AAAUAAUAAGUUUCAU
Stem-loop sequence	UUUGCUUGCACUGUUUGAUCACUCGUCUUAUUCAAAAAAAUUGUGCAAAUAUAAAAAACGAAAAGUUGUGCUUAAAGUACUUUGAAUAAUAAAGUAAGUCAAAAAAAAUAAAUAAUAAUUUCACAUUUUUUUGAAUAAGACGAGUGGUCAAACAGCGCGAGCAAA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK288977.1	ncRNA:20   CGCGACAAACUGGUGAGCAG   1   ||*||||||||||||||||| targets:1689   GCACUGUUUGACCACUCGUC   1708 Target Full Sequence	1.0	Oryza sativa Japonica Group cDNA, clone: J090085K17, full insert sequence	NA	coding protein	psRNATarget
AK072811.1	ncRNA:20   CGCGACAAACUGGUGAGCAG   1   ||*||||||||||||||||| targets:970   GCACUGUUUGACCACUCGUC   989 Target Full Sequence	1.0	Oryza sativa Japonica Group cDNA clone:J023143E03, full insert sequence	NA	coding protein	psRNATarget
CT837645.1	ncRNA:20   CGCGACAAACUGGUGAGCAG   1   ||*||||||||||||||||| targets:470   GCACUGUUUGACCACUCGUC   489 Target Full Sequence	1.0	Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN063B15, full insert sequence	NA	coding protein	psRNATarget
XM_015789761.1	ncRNA:20   CGCGACAAACUGGUGAGCAG   1   ||*|||||||||||||=||| targets:1303   GCACUGUUUGACCACUUGUC   1322 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group AT-rich interactive domain-containing protein 1B (LOC4343202), transcript variant X1, mRNA	AT-rich interactive domain-containing protein 1B(LOC4343202)	coding protein	psRNATarget
XM_015789762.1	ncRNA:20   CGCGACAAACUGGUGAGCAG   1   ||*|||||||||||||=||| targets:1303   GCACUGUUUGACCACUUGUC   1322 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group AT-rich interactive domain-containing protein 1B (LOC4343202), transcript variant X2, mRNA	AT-rich interactive domain-containing protein 1B(LOC4343202)	coding protein	psRNATarget
AK100378.1	ncRNA:20   CGCGACAAACUGGUGAGCAG   1   ||*|||||||||||=||||| targets:1397   GCACUGUUUGACCAUUCGUC   1416 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:J023085B20, full insert sequence	NA	coding protein	psRNATarget
AK289112.1	ncRNA:20   CGCGACAAACUGGUGAGCAG   1   ||*|||||||||||||=||| targets:1316   GCACUGUUUGACCACUUGUC   1335 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090096P07, full insert sequence	NA	coding protein	psRNATarget
AK065068.1	ncRNA:20   CGCGACAAACUGGUGAGCAG   1   ||*|||||||||||=||||| targets:1122   GCACUGUUUGACCAUUCGUC   1141 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:J013001K02, full insert sequence	NA	coding protein	psRNATarget
XM_015773291.1	ncRNA:20   CGCGACAAACUGGUGAGCAG   1   ||*||||||||=|||||||| targets:2154   GCACUGUUUGAUCACUCGUC   2173 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC9272202 (LOC9272202), mRNA	uncharacterized LOC9272202(LOC9272202)	coding protein	psRNATarget
AK106768.1	ncRNA:20   CGCGACAAACUGGUGAGCAG   1   ||*|||||||||||=||||| targets:160   GCACUGUUUGACCAUUCGUC   179 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:002-115-F05, full insert sequence	NA	coding protein	psRNATarget
XM_015790568.1	ncRNA:20   CGCGACAAACUGGUGAGCAG   1   |=*||||||||||||||||| targets:737   GUACUGUUUGACCACUCGUC   756 Target Full Sequence	2.0	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107277036 (LOC107277036), mRNA	uncharacterized LOC107277036(Os07g0616850)	coding protein	psRNATarget
XM_015791027.1	ncRNA:20   CGCGACAAACUGGUGAGCAG   1   ||*|||||||||||||=||| targets:1015   GCACUGUUUGACCACUUGUC   1034 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107277005 (LOC107277005), mRNA	uncharacterized LOC107277005(LOC107277005)	coding protein	psRNATarget
AK288595.1	ncRNA:20   CGCGACAAACUGGUGAGCAG   1   |=*||||||||||||||||| targets:676   GUACUGUUUGACCACUCGUC   695 Target Full Sequence	2.0	Oryza sativa Japonica Group cDNA, clone: J090051J16, full insert sequence	NA	coding protein	psRNATarget
AK289150.1	ncRNA:20   CGCGACAAACUGGUGAGCAG   1   *|*|||||||||||||=||| targets:2603   ACACUGUUUGACCACUUGUC   2622 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090099O03, full insert sequence	NA	coding protein	psRNATarget