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BaseInfo

ncRNA ID	novel_zma_miR6098
Species	Zea mays
Class	miRNA
Genome position	Chr2:131072796-131072949 [-]
Reference genome	RefGen_v4
Source	SRR2647343;SRR2647386
Length	24
Mature sequence(if miRNA)	1 - GGUCCUAGCACACUUGGUGAAGUU - 24
Stem-loop(if miRNA)	--AG   A   U   -    -      UU   - - - U       U      UUAAUUAUUUU        - -UC        AU     UCA CUG AGU UGCU GGAUCG  GUC C C C UAUGAUG AUUUAU           GUAUAGAA C   CGUUAUAU  U     ||| ||| ||| |||| ||||||  ||| | | | ||||||| ||||||           |||||||| |   ||||||||  A     AGU GGU UCA ACGA CCUGGU  CAG G G G AUACUAC UGAGUA           CAUAUCUU G   GUAGUGUA  A UUGA   -   -   C    U      -U   A U U U       -      ----------C        U CUU        GA
Stem-loop sequence	AGUCAACUGUAGUUGCUGGAUCGUUGUCCCCUUAUGAUGUAUUUAUUUAAUUAUUUUGUAUAGAACUCCGUUAUAUAUUAAAGAUGUGAUGUUCGUUUCUAUACCAUGAGUCAUCAUAUGUGUGAGACUUGGUCCUAGCACACUUGGUGAAGUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EZ105285.1	ncRNA:24   UUG-A--AGUGGUUCACACGAUCCUGG   1   |||-|--||||||=|||||||=||||| targets:37   AACAUAAUCACCAGGUGUGCUGGGACC   63 Target Full Sequence	2.5	TSA: Zea mays contig40942, mRNA sequence	NA	coding protein	psRNATarget
XM_008665629.2	ncRNA:24   UUG-A--AGUGGUUCACACGAUCCUGG   1   |||-|--||||||=|||||||=||||| targets:942   AACAUAAUCACCAGGUGUGCUGGGACC   968 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC103642327 (LOC103642327), mRNA	NA	coding protein	psRNATarget
JB169820.1	ncRNA:24   UUGAAGUGGUUCACACGAUCCUGG   1   ||--||||||=|||||||=||||| targets:2   AA--UCACCAGGUGUGCUGGGACC   23 Target Full Sequence	2.5	Sequence 7484 from Patent EP2559767	NA	coding protein	psRNATarget
HI409359.1	ncRNA:24   UUGAAGUGGUUCACACGAUCCUGG   1   ||--||||||=|||||||=||||| targets:2   AA--UCACCAGGUGUGCUGGGACC   23 Target Full Sequence	2.5	Sequence 7484 from Patent EP2074227	NA	coding protein	psRNATarget
LQ241489.1	ncRNA:24   UUGAAGUGGUUCACACGAUCCUGG   1   ||--||||||=|||||||=||||| targets:2   AA--UCACCAGGUGUGCUGGGACC   23 Target Full Sequence	2.5	Sequence 7484 from Patent EP2985353	NA	coding protein	psRNATarget