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BaseInfo

ncRNA ID novel_zma_miR6092
Species Zea mays
Class miRNA
Genome position Chr2:203621542-203621669 [-]
Reference genome RefGen_v4
Source SRR2647343
Length 24
Mature sequence(if miRNA) 105 - GGCUUGUUCGCUUUAGAGUGGAUU - 128
Stem-loop(if miRNA) --              A                             A                A
  GGCUUGUUCGCUUU GAGUGGAUUGAGGGGGAUUGGAGGGGAUU AAUCUCCUCUUAUACA A
  |||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||
  CCGAACAAGCGAAA CUCACCUAACUCCCCCUAACUUCCUCUAA UUAGGGGAGGAUAUGU U
UC              C                             A                U
Stem-loop sequence GGCUUGUUCGCUUUAGAGUGGAUUGAGGGGGAUUGGAGGGGAUUAAAUCUCCUCUUAUACAAAUUUGUAUAGGAGGGGAUUAAAUCUCCUUCAAUCCCCCUCAAUCCACUCCAAAGCGAACAAGCCCU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT067853.1
ncRNA:24   UUAGGUGAGAUUUCGCUUGUUCGG   1
  *||||||||*|||*||||||||||
targets:2212   CAUCCACUCCAAAACGAACAAGCC   2235

2.5 Zea mays full-length cDNA clone ZM_BFc0172L19 mRNA, complete cds NA coding protein psRNATarget